miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005227
Located between position 25473139 and 25473290 on chromosome 11 strand -
mature miRNAs for MI0005227:
         osa-miR809g (MIMAT0004043): TGAATGTGAGAAATGTTAGAAT

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
AAGGGAAGAGGGACTCGTCGTCGGCGGCGGCGGCGGTGGCGGTGGCGGCGGCGCGCGGCGGAGAGGCTGGAGAGATCGAT
GAGGAGAAAACGAAGTGCTCCTTAAGCGATCTCAGCCGTCCACCTCACCACCAGGCTATCAGGCGGCCCAAGATAACTCG
GTGACGTGGCCGCGACGGTTTTGGATTCGGACGACGTTAGGTGGATCGGATTCGGGGTACACCCGCACTATGTATTTGTT
GCTGGCCACTGTGTTACGCCCAAATTTTTGTACCGCCGACACCGAGGAGGAGAGGATAATGGAGTCATCCGACTGGGCGG
AGTTGCTGGAGGACGTCCTTCTAATAATTATGGAGCGGTTGGACATCCCAGACCTGATCCGCTCCAGCGCTGTATGTGCC
TCATGGTGCGCCGCGTCTACCGCCGTCCGCCGCGCCCGCTTCCCTCTCCCATCATCGGCGAAGCAGCTCCCGTGTCTGTT
CTACGCCTGTGAGGCCTACTCCCCGAACAACGCCGTCGTCCATTGCCCCTTGACTGGCGAGTCCATCCGAGTCCCTTTCC
CACTCGGCGTGGTCACCGAACACTCCGTGGTCGGTGCGGGGCACGGTTGGATCGTCACCGCCGACGAGGTCTCCAACCTC
CGCCTCATCAATCCCATTACCGGCGCCCAAGCCTGTCTCCCTCCTATCACCGGAATTCACCATGTGGAGAAGAGCTTCAC
CGGTGCAGGCAACAACGGTGCCATGATGTACAACGTCTTCGTGAGTTCGACACCTGGGCTCGACCCAGAGCCACTCCTAC
TCACGGCGAATGAGGCACGGGAATGCATGTACCATCGGGTGGTCCTTTCCTGTAGCCCGTCCACCGGTGGGGGCGCTTGT
GTCGCGCTGCTCGCCCATATGGAGTGCGGCGAGCTCTCGTTCGCCCGGCCTGGTGATGAGCGATGGACGTGGGTCTCGCT
GGACAAACACCCTTGCTTCGGTGGCTTTGAAGACTTCTTTCACAACGATGATGATGGCTTTTTCTACGCGCTATGCTTCG
ATGGATCCATCTACACCTTAGATCTCAATGGAGATTCTCCTATCGTGAGACAGATCACAGGCAAAGTTCCACAACGGTGG
TACCCTTCGGCCATGTACCTCCTACGGGCGCCATGGGGTGACATCCTTCAAGTACGGAGATGGAGGAGCTATGTTGACCT
GATGGCAACATCTTCATCGGAGCATCCAAATAATCTTGAGGTGGACGATGACGATGATGACCTAGATCCTATCGTTGGTA
TCAATGATGACATGTATCCATATCTAGAGCTCAAGACAACTGACATTGAAGTGTTCAGAGTCGATTTTGATCGGAAAAAA
CTTGTGAAGATGAAGAGCTTGGATGATCATGCATTATTCCTTGGATACAATAGCACAATGTGCATTTCAACCAAGGATTA
TCCTATGTTAAAGCCAAATTGTGCCTACATTACCGATGACTCATCTGAGTATGTCTACATGTATAAGAATAGTTGGCGAG
AGATAGGTATTTGGGACATGACAAGTAAGAGCTTACAGAGCTTTGCGTGTACCGAGAATTCGCCTCCATGGTTGAATTGG
CCCTCCCCGGTTTGGATAAAACCCTCACTTTTCTAGATAGGATTGTATTCAGGTTATTCAAGCCCATGTATGTTTTGTTT
CAAATAATCAAAAGGGATATAATTTGTAACCATATATACTATTGATCTCTATATACTGCTACCTTCGTTTCATATTATAA
GTCGTTTCGATTTTTGTTTTAAGTCAAACTTTCTTTAGCTTTGTTAAGTTTATAGTAAAATAGAGAAATATCTTTAACAT
AAAACAAAGAAACTATCAAAATATATTCTATTTTAGATTTAATAAAATAAATTTAGTGACATAAATATTGTTATATTTTT
TGTAATCTTGATCACTTTTAAGAAGTCTGAGTAAAAAAAAGTCAAAATGACTTATCACATGAATGGAGAGAGTATTACTC
CATTATCCTCGACAAGTCTCTTTTTTTTTCTTGGTTAACCATTATGAGACAAATAATTAGGAACCGAGGAAGTAGTTTAA
AGTTGTCAATTAAAGTTCTAGGCCCTCTTTGTTTAGGCTTATAAGCCAACTTATAAACGGAAAAGTCTAAGTCTAAACAA
ACAAGCGGCTTTTTCGTTTGGCTTTTTTGAAGCCATAAGCCATTCTAACACTATTAAGCCAAAAGCTAGGTTGGTGAAGC
TTTTTTGGCTTATATGAGGTAGATGCATGACTCCATCATTAAACTTAGGACATTAAATCCACCGGCTTATAAATCATATA
AGCTAATAAGCTGACTTAAAAGTCTAAGCCAATAATATTAAGCCTAAACAAAGAGGGCATAAGTTGTCAATATTGAAGAA
AAACGGAGTTACGGGTATAAAATTGCGCATATTGGGCCGGCCCAACTCACTCGTACTGGTCTCGGCCCGGCCCATCCGAA
TGGACTTTTGCAGCCCACAGGGCCTTCCACGCGTCGAAATGGAGCAAACTGGTGGGTTTGGTAGGCATGGATGGGAGGCG
ACACAGGCGGCGGCGGCGGCTCACCGCCGGATCTCGCCGTCGCGGAGGAGGATGGCTGGTGTGGCGGCCACCGTCGGAGG
CTGAGAGGATGTCGTGGGCGAACCGGAGCGCCCACGCCCGGGAGCCGCGAGGTATGCAAGGCAACTTGGATTGCGATAGA
GTTAGGCGTTGGGCGTTCGCATTTGGGATCTTGGATGATAGACATAGACTGATTAGCAAACCAATTCATAGTAAACAACT
GAAAGACTGAGGAATTAGTAGGAATGCTTGTACTAATGTACTCCCACTTTGTTTATCAAACGGTGTGATTTGTTTGTGAT
AATTTGACTAATTTTATTTATTTTTTGTCAACCAATCCCCATGTTACAGCGTGTAGTACCAATCAATACGTCTCCAGTTG
AGTAAGATATTGGGTTGGGGAAGGCTCACTGATCCAATCA