| Basic information from miRBase |
| hairpin accession number: MI0005228 |
| Located between position 5776955 and 5777088 on chromosome 12 strand + |
| mature miRNAs for MI0005228: |
| osa-miR809h (MIMAT0004044): TGAATGTGAGAAATGTTAGAAT |
| References |
| [1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development" |
>promoter (3kb upstream pre-miRNA, by PMRD):
CAAGTGAAGTGAAATTGAAGGGAAATTTTCAGTTTAATGAAATATCTCTTAATTCACCAGAAAAATAAAAAAATGGCTAA
TTTAACTTTTTTGTCAAAAAAAAACCTGTCACTTCAGCTTAATGTGGATTAATATCTCTTTCCCGCAAAAAAAAAGTTTA
TTTTTAGTCTTTTCCGTTTGCTCTAAAATAAGTTTATTTTTAAGTAATTATTGCATCAAAGTTTGTGGAAATAAAAGATA
AATACATTGTGAGTAGATAAAGAAAGAAAAAATTGCATTGTAATTTAATAAAATTAGGGTATTTTAGTCTTTTTTGTTCT
GTATTGGTACGTGTAGTATGGGTGAAAAATAAACTTACTTTGTGGCAGAGGTAGTATAGGGCACTTAGGACCCAGCACTT
AGGACCCATTTGGTAGAGCTCCAACTCCTACATTTAACTCCAGGAGTTAGGTCTGAAGTGGAGTTTTGGAGCAGCTTAAA
CCTAATTCATTTTGTGAGAGTGCTTCCGCTAGCTCTACTCCTATTTTAGGTGGATCTAAAACTGTTTGGCTGAACTCTAG
CTCCAGAAGAGGTGGAGTTAAAGTTGAAGCCGTGCCAAATAGGCCCTCAATTGCTCACAATTTTGAAAGTAAAGTTGAAT
CCAATCAAACGCAAACGCTGGTCATCTAGCCTCCATAAACAACTCAAAATTCTCTCCTTTTCTCGTGCACTTATTTATGT
GCCACACAAAGTCACAAACAAAAACTAAAACACATAAAAAATAGTCAAAGAAAAATAAAATTGCCTGTACATATTCTCAT
TGCCTACTTACAAGTAGGAAGAGGCCATGGTCCTCATGTCAGTGGGCATGAAGGCCAGCACCACCAGGAGCGCCAGCAAG
CACACCGGCAGCAGCAGCAGCAGCGTCGGCGGCGGCGGCAGCGGCGGCAGGATGAGCGGCAGCACCAGCAGCGACACGGT
GACGCATGCCAGCACCAGGATGGCCTCCGTGCTGAAGTAGCACCTGCTGCCGCCGTCGCCGCCGCCGCCGTTGGTCGCAT
TGTTCATCAGCCGCCGCCGCTGCTGCTGCTTCTGCTGTTGTTCTTGTTCCCTTGTGGTGTGATGCTGATGATGCCTTCCA
CCTCTCTGCATTTGCTGCTCTCTGAACATCTGTTCCTCCATTGTGATCATCAGGTGTTCAAGAAGCATGAAATGTGTTGT
CCGGACAGTTTGTTGTTGGGAGATTTTCTGTGATGGATTTCTGAAGATGATGTATCTTCTGATGAGGAGTAATTTCTTGG
CTCTCACCAGTCTGATTTGGAAGTTTTCTTGCAAGGAATATATCTGTGACAAAAAAAGTTGATGAATTTCAGAGAGATTT
GTAGAATGGCCGGCTATAACATACAGACATATTTGATTATTGAGGCCTTTTGCTAAGAATTTCAAGAAAGGTCAGGTTGA
CATAAACAACAGATTAATCAATCTCTGAAAATGGCATGCAAGATGAAAAAGAGGGAGCAAGACAGCTGCTGCAGTGAAGA
TTTTGGATGAAACAGATCAAAAACTCAAAGGAACCAAAGATTAATGGACACAAGGAGAAAATAGAAATGGTACCTCTGAT
CTTGAACTTGGTATTGCTGGATTTCTGGACAGATTTCCCCCTTTCTTGATTTCACCCAGGGGAGATCTTGGAACTAATTC
CACTCAGGAGGATCAAGAACACAAACTGAAAATGGCAACCAAGAACTTCCAAAATGCAGGAGGATATCAAAGGGGAACTA
GGAAAAATTTGACCAGGAAGAAGAGAAGAAAAGGATTGGAGCAAATGGAGTTGTGCAAGAACAGAACTTGTGAAGCTGAT
GAAGCAGGTAGATAGTGGTTTTGTGCAAACAAGCTTGGAACCTGGCCCCCTTTTTGGTGATGTGTGGGGGAAAATGTGAT
GTGAAGGAGATGAGCATGATGGGAAGGCAGCCATTTTATCTGTGGACTGAAGATGGTGGTTTTCAAATCTTGGAAGCCTA
GGTATGGAGGGAGGATAGGTGCATTGCATCAAAGGACCAAGTGTCCAAGTGGGAGAGGGGTGGGCCACAGTCTTTGCTCT
TGTAAGGTACATGGAAAAGTATTTTAGTTGGTTAGCATGTGTCCATCCAATTAATGTCCAAAAACATTTATTGGCTATTA
TGTGAGAATCGAATTTCTTAAGTCGTCCGATAAAAGTCATCAGATGTACAGTGAAAAAAGTTTGGTCGTTGGGAGAGAGC
AATTCGATTAAAATGTGATTTGTTGTAAAACATGTATAAAGTGGAGAATAGAATTTGTGTTGTGGTAGGATAATGATTTA
CAAGAGAAATAAGAAACTTTGTCACCGTCCAAAATATCGGAACTTAGGATGCGATCAGTGCGAAAATTCTCTTGAGTTTC
GGGTCAAACCCGTTTGGTAAAATCCTAGAGACAAACTAAGAATAAAATCGCACCAATTTCGCGTACTCGCAATGGAATTC
AACCAGCTAGAACTGAACTTTCCTTTTCTACCACTCTGATGAGTGCAACAAAGCTAGTGAAGAGAGATATTATTTTTCCA
AAGCACTTTTGGAAAGGGGAGGCAACTAGGCAGGGTTGCCTTGGTAGCTGCTGGAGGTTCCTCTCCCCTTGCTGCACTTT
TGTTCGTCTGTCGATTTATTCAGTTGGTCTCACAACCTCCCCCCTGCCCCTTTCCTATCATGACAATCCTTCCCAATTGC
ACTACACACCAAGCCTGCACCATCAGTTTTGCATGCCAAGTTGTTTTTATCCCTTCTAAAGTATCAAACCATCCTAATCA
TTCATGGGGGATGGAATTGCTTAGCTGGTAAAAGATTCACTTATCACTGTCAAGACTGACTTACATATATATGTTTGACA
AGAAAAACCTGTACTAAGTTAATTAATCTTCTAACTGAGTGTGTTGTGAAACAAAAAACAGTATATGTTTTGTCAGAAGG
AATGGTACTACTAAGAGATTAGTCGTTAATTGGAATTTAT