| Basic information from miRBase |
| hairpin accession number: MI0006986 |
| Located between position 958575 and 958797 on chromosome 11 strand - |
| mature miRNAs for MI0006986: |
| osa-miR810b.1 (MIMAT0005977): TGAACACCGATATGCGTCATC |
| osa-miR810b.2 (MIMAT0005978): AAGTGATTTAATTATGCCGTT |
| References |
| [1]Lu C, Jeong DH, Kulkarni K, Pillay M, Nobuta K, German R, Thatcher SR, Maher C, Zhang L, Ware D, Liu B, Cao X, Meyers BC, Green PJ, Proc Natl Acad Sci U S A. 105:4951-4956(2008)., "Genome-wide analysis for discovery of rice microRNAs reveals natural antisense microRNAs (nat-miRNAs)" |
| [2]Sunkar R, Zhou X, Zheng Y, Zhang W, Zhu JK, BMC Plant Biol. 8:25(2008)., "Identification of novel and candidate miRNAs in rice by high throughput sequencing" |
>promoter (3kb upstream pre-miRNA, by PMRD):
TCTGCTTCATCGTGTTCATCGGGACAATTTACAGGCACTTCCCTCAATAGTGCTGCAATTTCTGTGCTCTTTGCTCCACT
GAGGCACTGTCGACTTTCAGTTTAACAGAAAATAGAGTTATGATCCTGCAAGTTGGAAAAACATAATCACTTCTTGCGGT
TTGCTGCATTGTTTAAGCAAATTTAGAGCCCTTTTTTATTGCATGCAACTGTGATCACAACCAGCACTCCCTCGGTAAAA
AAAAAAAAAAACTCAATTCCTGAATTTTCGTATCTAACGTTTGACCATCCTGAGTTATAGTGACCTGAGTACCCAAGATC
TTGAGTTCAAATCTCCTATGGAGCGAATTTCAGATTGGGTTGTTTGCGGGGCTAAATTCCCTATTTCAATGGCAGTATAT
ATCCGGTTGGATATAGAGGCCGGGTAAAAAATAACTTTCTCTAAAAAAAAAGTTTGTCCGTCTGTTTTATTTAAAAAAAT
ATGAAAAAAATTTAAAAATAAGTCAGACATAAAATATTATTCATGTTTTATCATATAACAATAATAAAAATACTAATCAT
AAAAATATTTTATATAAAACGGACTTATATTTTATATAAAATGGACGGTTAAACAGTAGATACGTCTTTTGTCTTTTTGG
AACGAGGGAGTAGGCATTATGGTGGGCACGAGGTGGGTCCCACTGAGCATATTGCAAGTTGGAGTATATGAGAGGAAGGG
GTATTAAGAGTATGCCCAGCAGATCTTCTATCCGGCCTCGGCCACCCATCTTTTGTTTAGTGTATGGAAGTGAAAAATCA
TGCTCCTTTTGGATATCCTTTAAACCGAGTCCTGTCCAGCCAAATTTGGTATTTCTCTCTGCTCACTCCATCCCTCAACT
GCCCAGTTTCCACGACTCGCGCCACCATCCGGACTCGTGGGCAACAGGGAAGAGAGAGAGAGAGAGGATGTGCATACCGG
ATCGGGCGGTGAAGATCGCCGGAGTGGAGGCCCCGCCATCCTCGCAGACTGCGACCCGCGCTGCGCCGCCGCTCACAGTG
CCCCGCCGTCCGCGCCGACCGCGACCTGCGCTACGCCGCCACCCGCGTATCGCTTCGCCGTCGGGCCAGCCAAGCTGTAT
CGCTGCTCCATCGTGACTCTACTCGCGCCGCCCTGCCCTGTCGTCCCGCCGCATCACCCGCTCCGCTCGCACCGTCTGCC
TTTCGCCTCTCGGTTGGAATCAACGAGGAGCGATGCATATCTAGCAGTTTTGTTTTTCATTCTTTTTTTTCCTAGCAGAG
GATAAGGTCTGTTCCCTGGCGGTGTCTCGTCTCTCGTGTGTTTCTAAACAGAGGATTAAAACTGTATTCTCAAAGTGGTA
ACTATACAGTTAAATTGAAATATATAGCTCTTAAAAAAGATTGATAGAAATATATGGGTACTGGGTTGTTAAAAATATTA
GTAAAATATAGAATAATGTGATATGGATGATTTGTTGGAGTAGGTAAATATATGGAGGAGGAATATTTTTAGATGACCAT
CTAAATATAAATAGGAATATGGAGGTTCAAATTTAGATGAAATGATGAGGATGCTCTAAGGTGGGCCCCACATTTTAATA
AAGTACCTTACCATCCCAACCACCCTATTCTCTCTCTAGCCGGCAGCCACCCAAAATTTCCCCATCCTTTCGGCTTCTCC
TCACCCACCGGCCACCGATGACGACGCCGCCGGCAGCTCACGCTCGTGGATCCGTGATGGCGGTGGTGCTCGCGGCTGGT
GGCCCGCGGATCCAACAGCCGTGGAGGCGCTCATCGGAGGAGGATGCGTCGGCGCAGCGCTCGCGGACGACGAAGGTGGC
AAGTCACGAGCGGATCCGCGATGGTGGCGGCGGCGGCGGCGGCGGCATTCACGGGAGCGGATCCAAGGAGGCGCTCGTGT
ACGGCGCCGGTGGAGCTCGCGCTCGCGGATCCGCAGCGGCCCTCTCGGACGGCGTCTGTGGCGCTCGCGGTTGGCTTCGG
CGACAGATCTCCGGTTGTGGCGGTGGGGCCTGCGGGCGAAATCCGGCGGCGGTAGGGCTTGCAGCACAACTCCACACAGC
TGCTCGACTGCTCAATACTTCCCCTCCCCGGGCCTTCTTCCTCTTTGTTTCGTTTCCATGGCGGCAATCAACAGAACCGG
AGAGAGAACTAATTTTTTTTAATCCTTGTGGCCGGTCCTTAGCCATAAGGACGGCTCATCCAAAAGCCTCCTAGAAGGAT
CACCTCCACAATGTATAAATGCTTCTCAAGGGGCTTAAGACCCTCCTTATTTCTACATTGTGCATGACCTAATCAACTTG
CCCATGTATGTACTTTTTTACAGTATTTTTAGGTAGAATACCATTTTATAATTGCTAGGAATCGCCAACGCTCGTTTCCA
ATAGTTCTCTTGTTAGTTTGTGATTATAGCTTTCCTAAACGTATTTCAACATGATTAGCTCTCTTTCATCCAACCATCTC
CGTGAATGCTGAAAATTCAATATGAAGAAAAAAAAAACATGCTTTTTATCTTATGTATAAGAATTTATGGTAACCTTAAT
TCGTTTTTACCTTGACTATTTTTTTCTTTTTTGTTGTTGAAATGCCATCTTCTCAGTTCAGCAGCTCCACTTGCTACAAC
ATCCTGTCAAGAATGCTGTTGCAGAGAGGAAGCACACCCGCATCTCATCAGATATGAGTGATCCTTCAACACCTAGGAAA
ATTGAAGTTGAAGATGCCAAGAACATCTCCATATACAACGATGTGATTGACTTATTGTTTGAACTTGAGACCATCACAAA
AAGCTTCCGTGCTGACTACCTTCTTGGTGAAGGAGGGTTTGTGACTGTTTACAAGGGCTACATAGATGAGAATGTCAGGG
TTGGTCTGAAGTCACTACCTGTTGCAGTCAAGGTGCTCAACAAAGATGGACATCAAGGACACAGAGGATGGCTCGTGAGT
TGCCAACTTGTTCAATATTCACTATGGTTGCCATCATAAG