miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005233
Located between position 33946107 and 33946340 on chromosome 01 strand +
mature miRNAs for MI0005233:
         osa-miR812a (MIMAT0004049): GACGGACGGTTAAACGTTGGAC

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
GCAATATCTTAATGAACATTTATATGTTCAAATTTAGTTCAGGGGAAACTCAGCAAACAGCACAACTGTATAGTTTTCAA
AGGAACTAAAATATCAACACCTTATGTATCCAATTAGCTATAAAATTCTTAGTCCAAAGAGTTTACTAAGTTCTGAGTTA
GGAATTACTTTCACACCCAAGTTTGTGAATGAAGATTAATGAGGAACACAGAACTAGATTCATTAAGACAATCATGTAGC
ACAAAATTTCTTGCTTGGTGAAACTAAATCTATTATGGGCAACAGTTAAGAGTGAACTCATCAGATTACAGTACAATTTA
CGAATTAGTATGTCTATGTATGTCGTTTCTTTTCAAAGACTTATATAATGTTGTCGAACTTAGTAGGATAGTTAACTAAG
CTCTCAAATACTCCCTCCATCCCAATATAAGTGCAACCTAGTACAGATGTGACATATCCTAGTACAAATGTCTGTCCAGA
TTTGTAGTCGTGGGATATATCACATTTGTACTAGGTTACACTTATATTGGGATGGAGGGAGTATGAGTATTACCTTAAAA
TACATAAAGCTGGATGAGTTATATTGGTCGGTGAAGTAAAGCCTAAATATTGCAGAAGTACTTATAAAGAAAAACTGGAC
CTTGGTACTTTAACCGATGAATAGTTATTCAACAGGGTTACTAAGACTATGGCCAACATGCTTATACAGTCCAAAACGAA
TATGCAAGCAAGGAACATTGGAACCGAGACACTTCAATTTGCTGCAGAGTATCAATAAATACCAGATAGAAAAGAACAAA
GATTTTCATGAATTCCATTTTCTAACTAGCATAATACACGTTATGTGAATGCAATTTTAACATTGTTGTATTCCATTTGA
GAACGGAGTGAAATTTCAGATAAACACTAAAGCAGAATATAAGTGACAACCTGGTGATCGGGATTTTGGAAGACATAGCT
GCATGGCCTGTTAATATACACTGTACCAGAAGAAGGATTTAAAAATCCTGCCAAAACCTAGAGAAAACATTCGGTTAACA
TCCCATTAAGGAGCTGTACTAAGAAATTCAGACCAATTTTGATAGTCCGGTAGCCTAATTAGGCAAGTAAATATTGTACA
GCATTATAATAAAATTTATAGAACTTCTCCTCTGTCTTTTTTACTTTCTCATCCAGTCATCCTATATCATTCTATTCTGG
GTGAGCATATCACAAAAAGTTGCTAATCTGATTGTGCCATCTGGTCCATTCATCCAAATAGTCAAATGTGCTTGATGCTC
CACTCCTGAGATTCTATACAATGCTCACTCACTGGTTAGCCCAAGATACATACTAGTGGTTCTCGAATTAAAACATCCAT
CGGCTCCTGACGGTATACGAAAATTTCCTGGAGCAAGATATCAAAGAATGTGGTCCATGGGCACAATCTAATACTACAAC
TAAACTTTTGCCTACTCCATGAGCAAAAACGCTCAGGGCACGAACAAAATACACATGAAAAGCACAAGGACGACGCCCTC
TTCAGTTCAGGGGGGTAAAGAAGATGAAGAACCTTGAGAAGGGTGGACTTGCCGCAGCCGTTGGGGCCGAGGAGCATCCA
GAGCTGACCCGGAGGGACGCGGAGGGAGCAGTCCTTGAGCACCGGCAGCACCCGCCCCCGCCGAGTCGTCACCGACAACT
CGACGCCCTGGCCCTCGATGGCCGGCGTGGGTAGGGACGACGCGAGGACACGGAGGCGGTGGCGAGGGCGGGATACGAGG
GCGGCTCGGCCGGGGTCGTGGGGGCAGCGGCAGATGGCGGAGGTGCCGCCGGCGAAGGCGTGCGCCATCTCTGCGAGAGA
AGTGAGAGCGGTAGATGGAGGCTTGTGGCCTTGGGGGCCCGGTTCTCCAGAAGACCAGAAGGCTATAAGGCCAGATGCCC
ACAAGTCCATTGGTTGATGGGCCGATTTGGGGCTTTGGGGGCAGAGAGTGCGGATACCATCCTGTGCTCCTACTGTAGTT
CGTGGAAACGGATTCTCTAACTTTGTTTAGGGCCTGTTTGGTACAGCTCCAGCTCCACCCCTCCTGGAGTTGGAGCTCAG
CCAAACAGTTTCAGCTTCACCAAAACTGGGAGTGGAGTTGGGTGGAGTTCTCTCACAAAATATACTAGAGTTGTGGAGCT
GGGTTTAGGCAGCTCCACAACTCCACTCCAGACTCAACTCCTGGAGCAATATTTAGGAGTTAGAGCTGTACCAAACAGGC
CCTTAGTTTACAGTTGTGCCACTTATATGTGGGCTCCACTTTGTTATGATCCACATCTCAGTAGTACAACTACAAACTGT
ACAAAGTTAGAGGAGTCTTTTCTCTAGTTTGTGTATTTGCGGTTCCTCTTACAAGAAAAACACAGCCACAGAGACCATGT
GGTACATTTTCCATTCACAAAAAAGAAAGAGAATAAACCATAAAAAAAGAACGGGCTTTTTATTACCTGAAACAAATATG
TGAAAGATTTCCAATCATGTAATCTCTCCGTCTCAAAATATAACAACTTTTAGCTCTTATGATTTGATGTGACCATGGCT
ACTACGGATACATCCGTTGCTCACCTCATGGATGGACAACAAGATATCAAGTTCGAGTCCTCCAAGTCTCAAAATCCAAT
TCGGCCACCTACTACCCTGCTGACTTCAAACGGCCGCCGAAGCTCCATACGACCTCCGTTTTCGGCCCGTGAGTACTTGA
TGGAAAGCTCTCGGAGTCCTCTTTCCAATGCATCAAGCCTCATTGCCAAATTCCATCTCAGTCGGCAGCAACTGAAGAAA
CAAGGTGCTGCGACACCTGTAATGGGACTATGGGCTTGTAACTTCATTTGGGACCCCGGCCCAGGTGGGGCCCATGTGGG
GTGCGCCCCAAGCTGGTGGAGCACGACCCTAGGCACCCCTAGGTCATCCTCCCACCCCTATATATAGCTAGTTACCCCTT
CAGGGTTTCTGGGGTTTTGTTAGAATAAAGTTTAGCCATT