miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005234
Located between position 1936324 and 1936493 on chromosome 02 strand -
mature miRNAs for MI0005234:
         osa-miR812b (MIMAT0004050): GACGGACGGTTAAACGTTGGAC

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
GTAACTGCGTGGTTACCACGGTGCTTACCGCGGGGGTACGGTAAGGGTTACCGGCGGTAAGGTTTGGGTGAAATTTGAGC
AAATTCAAAAATTCCAAAAAAAAACGAAAAAAGCAAAAAAAAAATCATGGATACAGTTCTTGGTTTTTAATGCTAGATGG
TGATTTTTTTAAAAAAACAAAGAGTAAGATAAAATCAAATTTGAGGGCAAAACCGATAATTGTTTAGGAAATGGAAAAAC
AAAAAAAATGTATTGGGCTTCATTTTTTATTTTACATCCACAAGTTAGGTTTGCAAGTATCATATATATTATTCTAATTA
TCCCTACTTTCTACACGCATTTAAGTGTTTTTTTTATTTTTTAGTATTTTTCATTTTTTTTCATGTTTTCTGCAATATCG
CGGTTACCGCGTCAAACCGCGACCAAACCGCGAAACCGCCAATTTTTTAATTCAATTTTTTCGAGATGAAATTCACACGG
TTTTTAGCGGTTACCGTTGGGGGGTAACCTCCCCAAAAACGGTAAGGTAAACCTGGGCGTGGCCAAATCACTTTGTCATG
TCACACACAGTCGGCGTGGCAGTGGCAAGAGGCTGGCGTGGCAAAACAACGCTACCACACTAGCTACTTGGCTGGCGTGG
CCAAAAATTTCAGTTTTCGGAAATATTTTTCGGAAATGTCTATTAATAAAATTTTAAAATAAAAAAATCCGAATATTTGC
TATGTTGTCGCTAATGACCCCATTTGGACATGGTTAATAACTATGTTATTTACGCATGTGGCAATTTAATTAACAAAATA
ATAACTATGTCTATCTATCTTAAATTGTGTTTCTAAATGTCACTGTAGTGTTAACACAGACAGATTACTAGTATTCAATG
AAATTGACACACCCTGTATCGGTTCTATCTATCTACCCTATAGTTCAACAAATACTTTCACTCATTCTTTCATTCATCAC
TCTAGGGTTCAGATTATTCGTATGAGATCCAACGCTCCTGATCTTCTCCTCCTCCCACCTCTGTATTCGCCGCTCTTCCA
ACCCCATCAGCGCCCAGATCGCTCCCCCTCCCGTTGCCCCCTCTCCCCCTCCTCTTTCTCGTACCCACCCGAAAATCACG
CCGCGAGATCCCCAGCGCCAAACCCATCGTCCACCATGGCGACTCCTCGAACCCTCTAGCGTCGCCACTCAGTGCCACAG
TTTGAAGGTGTTTTTTTTTGTGTGATTATGATGGCTCATGCTCTGTTGCAACGGTTGCTATGAGTATTGGACGAACTGAT
TAGATCTCGAGGAGAGGATCATGGCCTTGGTTGCCTCATCGTTATGCAGGTGGATCAAGTGTATTATTTGATTATTCAAG
GCCGCATGCTCGCCGTCGACCCCAACACCCCTGGTGACGATCCTCGTCAGATCAAGGCCAAAAGCTGCCCCCCATCCTCT
GTTCCACCCCTGCAGGTACAACGAATTTCCTCTCTTCCTTTTCATGTTCTCTTTAGCGTGTCATGATAGTGTATGTAGAG
TTTATTCTTATACTCCCTCCGTTTTAATATATATGACGTTTCCGACAGCATCGAGAAAATTAAGGATAGAGCGATTTTAC
TATTTTGCCCTTCATCCCTTTTCATCGCAGTGTTCGCGCACGCCGGCTCCCTCCACTCCGGCTCCCTTGCCATCTCCCCC
GCGCTGCCTCGACGCCGGCTCGCTCGTCGTCTCCCAAACGCCGCTGCTCGCGACCACAGGAGAAGGAACCCGCTGCACAA
CGCTCTTCCCGGACGCCGCGTCGCCCTTTCTTCTCAGACCTTCCCGGTGAAAGCGGCGTTGGAGCCTGAGATCAAGCGGT
CCTTCTCGATTCAGTCCTCCTCCTTTCTCGTCTCCAAGCAGCATGTCCTCCCTGGACCTCGGCTCCTCACTCGTCACCCT
CTCTGTAAGTGAGCTCCTCGATCTCGCCTTCTCCAACTTCCAGCTTGTTTTTTTTTTCTCATTTCCTCCAATTTTAATTG
CCTCATTGCCTGGTTTTGCCCAATTTACAATTTAATCAGAAGGAGAGGAGAAGCCCTGGTTCTGGTTGATCTCCAGCCGA
ACGGCAAGAACGACGATGTCATCTGCAGATGCAGTACGTTCTGCTTGGTTTCAGCCGAGCGGCAAGAACAACAGTGGCGG
CAGCAGCAAGCCCGACGTCCGGCTCCCTGTGCGCCATGCTGCCTGACTCTTGCTCGCCCCACAGGCCACAGCTCGGGGTG
GGTTGCCGCCAAATTGGGGTGCGGCGGCGGCGCACGGGAGGCATGAACGGCAGCGGCGCGTGGGAGGAGGAGACAGTGGC
GAGCGAGTCCGGTCGCGATGAGGACGAGGCAGCGCCGTGGCGATGTTGAGATGAAGGGCAACGATAGAAATTAACAAACG
TGACTAGGACGAATGAACTGGTAGCGTCAAACAAAAAAAACGATTCTGATTTGCACTGTAGCGTCAAATAAAAAGAAACA
GAGGGAGTACAATACAAAGATCAAAACAGACTTGGTGGTGGTGATTGTATTGACCATCAAGCAGGTAATTTTTCTTGTGA
TGTTCATGTTTACTATTATGTCCAAACTCCATAGACAACTTACACATTTAGAATTACATCTTGTATAGACAAATAAGTGT
ATGTATTAAAAATGTCTGAAGAAAATGGACTGTATGATCATAGTGCCTTTCAACCGTTGTTTTGTGCAATGTCCATGATA
TCTCCTCGAGATTAATCGATTTCTACTTTTGTACCATATGCAATGTTTAATTTTTAACTGCTCAGGCTCATGCTATTTCA
TATTTTGGTGCTTCTGAAGCGATCTATATTTCTTGATTCTTTGCTATCGTCCTGACAGTGCACCATAATTGTCAGAAATC
TCCTAACCTGAAGCTAATATATTTCTTGTTTTAACTTCACTGATTCTTCATATGTTTCCTTTACTGAATAGAGTTTTGTT
GAAAGCTACTCCCTCCGTTCCAAAATAAGTACAGCCATGG