miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0005236
Located between position 22394230 and 22394382 on chromosome 07 strand +
mature miRNAs for MI0005236:
         osa-miR812d (MIMAT0004052): GACGGACGGTTAAACGTTGGAC

References
[1]Luo YC, Zhou H, Li Y, Chen JY, Yang JH, Chen YQ, Qu LH, FEBS Lett. 580:5111-5116(2006)., "Rice embryogenic calli express a unique set of microRNAs, suggesting regulatory roles of microRNAs in plant post-embryogenic development"




>promoter (3kb upstream pre-miRNA, by PMRD):
AGTTTGCCTTCCGACTAGTAATGATTTAGTAATTTGCTTGTACAAGAGCTAGCTTGGGTCAACAATTTTAGTTTGTATAT
CCTCCATATGTCTGTTCCATTTCAGCCAGCAGGAAGAGAAATCAATATTGTCTGAATTCAATGACAGTCCCAAGTAAATT
TAGATATATCTGCAGGCTCATGTTCAGCAACCAGATAATGGTAACGATAACTAATTGGTAATAATTGCTTATCTCTTTGG
TAAAGGCAACGCAGAAACCGCATCAGCATATGCGGAGTGGAAGACAGAAAACACTAAACTGAATCTTTAGCACATCAACA
AATTATCACATCAAGTTCAAGATCGCTCTGCTAGTCTGCAACTAACAAAACAGTTGGCGAACACTAAGCAATAGAAAAAG
ATTTTCCAATAAAAAACTGCAGCCAAATCACGCATTCAGTACTGAGCTTACAACCCAAATGACATGTGCACATATTAAAG
ACGATTTGAACATAACCATGGCAACAGCTAAATTGATATCCCATCTTGCAATTTGAACAATATACAGAGGAAGGAGAAGC
ACTCACTGTTTTGATCACAACGCGCAGCTCGAGATGGTGAATGCTTGGATAGCGATTGAGAAGCATCTGAGAGCCCTGAT
TGAAAGCCTCGCGCGATCCATGAGCAAAATCAGAGACAGAGACGCATAACGTCCGCAGGCGCGGCATCCTGCTGAAGTAG
ACCAATCCAGGCCAGTAGAAACCTGGCCACCTGAGCTGCTCCATCTCATCTGCCACAATGCTCACGCCATCAAGATGCTC
AAGGAAGCATTCGGACACAGACAACTCCTTGAGCCCCGGCAACACGGCGTTGAGCCGACGCAACCACCGCATATCGTGCA
GAGCCATCAGTGTCAGAGGCGCCAGCCTGAGCGTCAGGGAGGCCAAGCCACGGGACTTGCCAATGTCTAGCCATTCCAAG
GAGGGGAGCATGGCATCGTCCAGGGTGAGCTCGCCATTGAACCGGACGTACACCAGGTGCAGCTCCCTGAGCTTGGCGAA
GACACCCGATGGTGGCAGCGATAGGCCGAGAAACCCCAGGCTCAGCGTTATCTTGGTGACCCTCATGAAGCAGGGCAGCT
CGAAGCCGGCGCCCATTTCGTCCACCACCACCCCAAGCTCCTCGACCAGCTGCTCCACGACGACCATCTCGTCGTTGAGA
AGTTCGAACGGAACCGAGGACGCGTTGCGGAATAAGAGCTCGCCGGTGAGGCGGGGCTCGGCGACGCGGAGCCAGGAGGC
CGTGGCGCCCGCCGTGGCGCTGTTGAGGGAGGTGACCTCGAGCAGGCGGATGTGAGTGGCCGTGGAACCCTTCCTCGCGT
GGGCGGCGAGGACTTCCTGCACGATTCTGGAGTCGGGGGGCTCGTCATACTGCAAGACGATGATGTCGACATGGGTCCAG
AGATCGAGCCAGCGCCTGGAGAGGACGGCGGTGGTGGCGACGTTGCGGATGTCCCTGAGATGGCCCAGAATTTTGGCGAG
GGTGTCGTTGGAGAGGTCGCTGAGGCGGTCCACGCCGCCTCCGTCGCCTTCTCCTCTGCGGTCGCGCCCGTCGTCGTCGC
CGTCGATGTCCATGGGAGCGGGGGAGGGGGCTGCGACGTCCGTGGCGCTACCGCCCTCCCCGTCGCTGCCTTCGTCGATG
GGGACGAGCACCGCCGGCGCCATGGCCGTCGGCGACTCGGCGTCCTTGGGTTTGATTTGCTTGGGCGAGGGGGGAGGCGA
GGCGGGGTTTGGGGGATTTGGGTTTTGGAGAGAGGGAGAGAAGACGGCGAGGAGAACTAATGTTGAAGACGAAGTGAAGG
GGAAGCGTGTGTGTTGGCTTTATCCCCGTCGCTCGTTTGGAAAGCAACGGTGGGATGCGAAGCGATCCTTCCCACGATCA
TCGTGTGAGGCCATCTCCGACACCTTTTGCCAGCGTGTTCAGGTACAGCACCGGACAAGTCAAGGTAGGTCCATATGTCA
GTGAAACTGGGAGAAGAAAAAGGGTCCAGATCCCAGTTGGCTACCAGGTGAGGAGTTGGCATGATCTATGCCATTTCGTA
TACCTCAAGGGCTAGAATTAAGCCATGTTAATTTGTACTTTAAAAAACAGTAACTAACCATGCAACAAATAAACTTGCAT
CAACAACATGTCACAGGATAATTTTTACTGCAGAATTGTAGAATTATCACAGAATTTTCATGCTTCATCTATCGTATAAA
TTTAGGTCCCGTTCTTTTCTTCAACAAGAGTTGGATGAAGATTAAGATTTTGGTGACACGTTTTTCAAACTACTAAAGGG
TGTGTCTCATGCAAAAAAATTTCTAGACGAAAGTTGCTCTAAAATATCATATTAATTTATTTTTTAAATTTTTAATAATT
AAACTCAATCCATCAAACGTTAATACCACCTCGTTCTGCGTAAAAAAATTAATCTTCATCTTCAAGAGAAAAGATAACCA
CCTAGTAAGAAAAAGTTATTCCCTCCGTATTTTAATGTATGACACCGTTGATTTTTTTATCAACGTTTGACCATTCGTTT
TATTCAAAATTTTTATGCAAATATAAAAATATTTATGTTAGGCTTAAAGAACATTTGATGATGAATCAAGTCACAATAAA
ATAAATGATAATTACATAAATTTTTTGAATAAGACGAATGATCAAACGTTGGATAAAAAGTCAACGGCGTACAATAAGAG
AAGGTAGTAGTACATATAGCATTTTCCATAGAGTCGAGGCCTCTTGATCGATCACGCACGCCCACACCTACGGACGCGAA
AACCGGTCGGCTGGTCGCCCGCGGCGGCGCGGCGTCGGCGTGAACGCGGCTCGGTGGGAGACGCCGCCGCCGCTGGCGTT
GGATTTTCGGCTGCGTCACGCTGGAGGGCGGGGACGTCGTACGTCCCGCTCCCGCAGCCGCAAGAACGGGAGTTGCCAAG
ATAGTGGTGGCACCGATGGCACGCAACACACAATAATCCT