miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



Basic information from miRBase
hairpin accession number: MI0008296
Located between position 5229013 and 5229254 on chromosome 03 strand +
mature miRNAs for MI0008296:
         osa-miR812g (MIMAT0007847): AAGACGGATGATTAAAGTTGGACA

References
[1]Zhu QH, Spriggs A, Matthew L, Fan L, Kennedy G, Gubler F, Helliwell C, Genome Res. 18:1456-1465(2008)., "A diverse set of microRNAs and microRNA-like small RNAs in developing rice grains"




>promoter (3kb upstream pre-miRNA, by PMRD):
CGAGCCAGAGGCAGCTGCCCCCATCTTCCCCGTTCCCGACATCACCTGTGAAAGAGCCTCTTGCGTACAGTTCATCAAGG
AAATCCAGCGCTCCATCACTGAGGAATAGGTAGCCTGGCCTCCCTTGTGTAACTTTTGATACCAAGTTAGGCTAATTTGG
TCAGTGGCAACATCTGGAGGGCACTACCCTGCATGCTGCCGCAACTGTCAGCTAATTCTTTTTGCTCGGTATCAGTCAAA
ATGCTTGGTGGTGTTGTTGTATCATGTAAGTGGAACTAATGCGAGTGAGTCACCTGGAGAGGTGTCTCTGTGTGGGTGAG
AGTGAATGCCTCTCAATTCTACCCACCCCCTGTACTGATCATGAGACACGAACCGGGATGTATTTTGTATATTATTAATC
CACTATTCTTTCAGCTGTTGTAGCTGCCTGACCTGCTACTAGTATTTGTTTTTCCTTTTACTAGCTGCTACTAGAATTTC
TGTCCAATTCCCTAAAAAAAAGCATTTCTGTGCAAACTGCTGTTGTAGAATAGAAGTACACATCGTACGGTGGTGGCCGT
AGGCCCTGTTTAGATCTAAAGTTTTTTTTCCAAATTTTCAACTTTCCATCACATCAAACTTTCATACATACAGCTTTTCT
ACCATATTGTACCAATTTTAACTAAACTTCTAAACTTCAGTGTGAACTAAACACAGTCTACATATCAGTTCACCAGGCAA
CCAAAACTAATGGCGTTCTGATCTGGATGTGAGGCTCAAATGCTCAATCATTGGCAAGATGATCATTCCTTCTCGCTTGG
ACCGGGCCCACCGTCGTGGAGAGTGGACAGTGGCGCTGAAAATTCCTCAGTTCCATCCTCATCGACTCCGTCTGCGTCGT
CGTACAACCTCCCCCACGACCACGATCCATCCATCCATCCATCCATGGGGGGAGGAATACTGGATAAGAACGCCCATATC
CCATATCCTGTATGCCTCCAGGAGTAAGCAAAGGCAAGCTAGGCCTCCTTTGGTGTTCTCTGCACTGCACCGCAACCCCA
CACGCTTCCCGCGCTGATTGCTCCCTCGGCGAGCCACTGCACCAGGGCATATGCAGCGTCCGTGCCATCAAAGCGCCCCC
GATCGCGACGTCTCGTGGTGTTGTTTTGGGTGGTCGTTGTGTTCGGGTTCTCGCGTGCGCGACGACAGCGGCGTCCCGCG
AGAGAGACGTGCGCGCGTACGCGAGAAAAGCACGGTGATTACGTGAGCGCCGCCGCCTCCAATTCCTGCGACGACGACGT
CCCTGTCTTGGTTTCATTAGGTTGGTTGGTTGGTTGGGCTGTTTGCTTCGTGTGCGTGTGTGTCAGTGTGTGTGTGACCG
TACTGTGGCGGCCGGTGGTGCAGAAGCAAGGACGCGCACAGGTGGCTTCGCTTTTGATCAGGTCGTATTACTTTGCAGAC
TTATCTCCTCCTCCTCATCACCATGGGAAGGGAGAAAAAGAAAGGCAGAGATGAAGGCTTTGCGGATGATGGCTTCATCT
GCTGCAATCATTTGATGCGGATAATCGCTCGTGGTTTTTTACAGACAGCACATCGCAATCCAAGTGTAGCTACGCAACCT
GCAGGCTGCCATTGTCCCCCCCCCCCCTCCCCCTCCCTCCCTATCTCCCAGATTCAGAGAGAGTTGTGCTAGTTCAATAG
TTATTCCTGTCTGCAATGTGTATACTGTGCATGCACATGCCATCCAGTAATTTTGCAAAAAGGAAAAAAAAAATCATATT
ATGTGGTTTTTGAAGCCCAGAGTGGGAAGAAGCCCAAATGCCCAATCAATTGGGCCAAGGCCGAACTCCATCCACATCAC
GAACAATTGAACAAAGCAAAGGTGGCATAAAAGGCAGAAGACGCCAAAACATGTGCATGCATCTTCTGTGCTCTGATCGT
GAGTAGTACCAGTACCAAATATTACATCATGGCATAATTAATCAGTCCATGGCAACCACTTGCATGATATTCTAAACACA
TATACTTACAAAGACATCCAATTTAATAATCTACATGGCTTAGCAAAGTCACCGCTAAAGATTTTTCGTTAGGGCAACAC
GACTGATGATATATCGATCATTGATACTACTAATAAACACCACCACTACTGAATTACTACCCTGCAATTGATCGATCCAT
TAATTAACAGCTACTGTAGCTAGTTAATCCTCCGTCGGCGCCGGCCCCGGCGAGTGGCGGCGCTCAGCTGAATTGGTCGT
AGACCCCGCCGCAGTAGCCGGCCGCCGCCAACTCCAGCATGTAGCTGTTGTACGCGTACTCACTCATGTAGGTGAGGTCG
GCCTCCTCGGCCGCCGCCTCCACGCCGAACTGCCCCGCCAGCGCCGGGTGGTACGTCACCGTGGAGAACGACGACGAGGT
CGGGCTGCTGCTGCCGCCGCCGCCGCCACCACCGCCGCCGGTCGTCGCCGCGGCGACAGCTGCTAGCTTCGCCTTCTCCT
CCTCTACATCCGCCAGCCTCTCCTTCAGCTTCAGCAACTGCAAGTACGTTAATCAAAATTAAGCCACAGTTCATCTCCAT
CAGCAACGACGAACGAACGAGAACGAGCGCGCGATGTACTGTGTGGTGTTCGTCTGTTCGATCGAGTTGGCTAGTTACCT
CGGTCTCGAGGTGGCAGTTCTGGAGGACGACGGCGTCGTGGGCGGAGCGGAGCTTGGCGAACTCCTCCTCCATGAGCTTG
CTCTTGTGGCGGGCGCGGCGGTTCTGGAACCAGACGGCGACCTGCTTGGCGTCGAGGCCCAGCTCCGCGGCGAGCTGCAC
CTTGCGCGGCGTCTCCAGCTTCCGCTCCTTCTTGAAGCTCATCTCCAGAAACCGCGCCTGCTCGTCGCTCAGCCGCCGCT
TCTTCGCCTGCTCATCCCCTCCGCTCTCTCCAGCCAACGCTGCCGCCGCTTCCGGCTTCACCTTCCTCCTCCGCCGCTGC
CGAGCCTTCTTCTGCTCGCCACCTGCAACACAACAACCAA