miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

Basic information from miRBase

hairpin accession number: MI0000874

Located between position 120573219 and 120573287 on chromosome 7 strand +

Overlapping with sense strand of D3ZYZ8_RAT (intron 17).

(Ensemble: ENSRNOT00000009864)

mature miRNAs for MI0000874:

rno-miR-33 (MIMAT0000812): GTGCATTGTAGTTGCATTGCA

rno-miR-33* (MIMAT0017104): CAATGTTTCCACAGTGCATCA

You can find this miRNA in ENTREZGENE: Mir33 (accession: 100314214)

References

[1]Watanabe T, Takeda A, Tsukiyama T, Mise K, Okuno T, Sasaki H, Minami N, Imai H, Genes Dev. 20:1732-1743(2006)., "Identification and characterization of two novel classes of small RNAs in the mouse germline: retrotransposon-derived siRNAs in oocytes and germline small RNAs in testes"

[2]Landgraf P, Rusu M, Sheridan R, Sewer A, Iovino N, Aravin A, Pfeffer S, Rice A, Kamphorst AO, Landthaler M, Lin C, Socci ND, Hermida L, Fulci V, Chiaretti S, Foa R, Schliwka J, Fuchs U, Novosel A, Muller RU, Schermer B, Bissels U, Inman J, Phan Q, Chien M, Cell. 129:1401-1414(2007)., "A mammalian microRNA expression atlas based on small RNA library sequencing"

[3]Linsen SE, de Wit E, de Bruijn E, Cuppen E, BMC Genomics. 11:249(2010)., "Small RNA expression and strain specificity in the rat"