| chr | coordinates | strand | name | NCBI | UCSC | observed | class | function | loctype |
| chr9 | 4835520-4835520 | + | rs10815094 | A | A | A/G | single | intron | exact |
| chr9 | 4835540-4835540 | + | rs295257 | A | A | A/T | single | intron | exact |
| chr9 | 4836253-4836253 | + | rs10974809 | A | A | A/G | single | intron | exact |
| chr9 | 4836327-4836327 | - | rs188428 | A | A | C/T | single | intron | exact |
| chr9 | 4836395-4836395 | + | rs6476917 | C | C | C/G | single | intron | exact |
| chr9 | 4836445-4836445 | + | rs3780364 | C | C | C/G/T | single | intron | exact |
| chr9 | 4836504-4836504 | - | rs211635 | T | T | A/C | single | intron | exact |
| chr9 | 4836574-4836574 | + | rs3837253 | G | G | -/G | deletion | intron | exact |
| chr9 | 4836610-4836610 | + | rs159353 | T | T | C/T | single | intron | exact |
| chr9 | 4836618-4836618 | + | rs211634 | T | T | G/T | single | intron | exact |
| chr9 | 4836642-4836642 | - | rs295256 | G | G | C/T | single | intron | exact |
| chr9 | 4836695-4836695 | + | rs7023960 | C | C | C/T | single | intron | exact |
| chr9 | 4836896-4836895 | + | rs33950522 | - | - | -/TTTTTTCT/TTTTTTCTTTTTTCT | mixed | intron | between |
| chr9 | 4836901-4836901 | + | rs3837254 | T | T | -/C/CTTTTT/T | mixed | intron | exact |
| chr9 | 4836901-4836900 | + | rs57427254 | - | - | -/CTTTTTTT | insertion | intron | between |
| chr9 | 4837168-4837168 | + | rs3824430 | T | T | C/T | single | intron | exact |
| chr9 | 4837172-4837172 | + | rs295255 | C | C | C/G | single | intron | exact |
| chr9 | 4837570-4837570 | + | rs7874244 | T | T | C/T | single | intron | exact |
| chr9 | 4838297-4838297 | + | rs10815095 | A | A | A/G | single | intron | exact |
| chr9 | 4838357-4838357 | + | rs10815096 | A | A | A/T | single | intron | exact |
| chr9 | 4838448-4838448 | + | rs73639232 | A | A | A/C | single | intron | exact |
| chr9 | 4838549-4838549 | + | rs12335494 | C | C | C/G | single | intron | exact |
| chr9 | 4838630-4838630 | + | rs295254 | A | A | A/G | single | intron | exact |
| chr9 | 4838860-4838860 | + | rs7875667 | A | A | A/T | single | intron | exact |
| chr9 | 4838875-4838875 | - | rs159433 | G | G | A/C | single | intron | exact |
| chr9 | 4838897-4838897 | + | rs35356397 | G | G | G/T | single | intron | exact |
| chr9 | 4839027-4839027 | - | rs188429 | C | C | G/T | single | intron | exact |
| chr9 | 4839107-4839107 | - | rs211535 | G | G | -/A/C | mixed | intron | rangeDeletion |
| chr9 | 4839107-4839107 | - | rs41360044 | G | G | A/C | single | intron | exact |
| chr9 | 4839107-4839107 | - | rs58061394 | G | G | -/A/C | mixed | intron | rangeDeletion |
| chr9 | 4839107-4839107 | - | rs62958760 | G | G | A/C | single | intron | rangeDeletion |
| chr9 | 4839107-4839106 | + | rs60432876 | - | - | -/T | insertion | intron | between |
| chr9 | 4839178-4839178 | + | rs35008253 | T | T | -/TT | in-del | intron | exact |
| chr9 | 4839179-4839179 | + | rs34569485 | T | T | -/TT | in-del | intron | exact |
| chr9 | 4839183-4839183 | + | rs35874509 | T | T | -/T | deletion | intron | exact |
| chr9 | 4839515-4839515 | - | rs35815255 | T | T | A/G | single | coding-synon | exact |
| chr9 | 4839647-4839647 | + | rs17803780 | T | T | C/T | single | intron | exact |
| chr9 | 4840141-4840141 | + | rs12375841 | T | T | C/T | single | intron | exact |
| chr9 | 4840250-4840250 | + | rs36053361 | G | G | -/G | deletion | intron | exact |