miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Targets





Basic TFBS information


chrcoordsinatesstrand (relative)position (relative)
motif
sequence (consensus)
matscorecorescore
TF name
chr12 93562339-93562345
+
615
V$DBP_Q6
AGCAAaa
(AGCAHAC)
1
0.979
DBP
chr12 93562014-93562026
-
290
V$XVENT1_01
ccaCAAATatact
(SBNCTATTTGYSY)
1
0.919
Xvent-1
chr12 93562577-93562589
-
853
V$XVENT1_01
aaaCAAATcaccg
(SBNCTATTTGYSY)
1
0.901
Xvent-1
chr12 93561978-93562000
-
254
V$PPARG_02
acctatgttctttTTACCtcctt
(AAGTAGGTCACNGTGACCYACTT)
0.883
0.665
PPARgamma:RXRalpha,
chr12 93562628-93562650
+
904
V$PPARG_02
caccgGGTCAgtgtcctccagga
(AAGTAGGTCACNGTGACCYACTT)
1
0.657
PPARgamma:RXRalpha,
chr12 93562542-93562551
-
818
V$POU1F1_Q6
cattATTCAt
(ATGAATAAWT)
1
0.951
POU1F1
chr12 93561976-93561995
-
252
V$PPARA_01
tcacCTATGttctttttacc
(CARAACTAGGNCAAAGGTCA)
0.939
0.721
PPARalpha:RXRalpha
chr12 93562640-93562659
+
916
V$PPARA_01
gtcctccaggaCAGAGgtca
(CARAACTAGGNCAAAGGTCA)
0.899
0.855
PPARalpha:RXRalpha
chr12 93562647-93562659
+
923
V$DR1_Q3
aggaCAGAGgtca
(RGGNCAAAGGTCA)
0.909
0.953
PPAR,
chr12 93562851-93562865
-
1127
V$PAX8_01
acTCACGcttgacac
(NNNTNNNGNGTGANN)
1
0.969
Pax-8
chr12 93562845-93562865
+
1121
V$PAX3_B
ggtggcacTCACGcttgacac
(NNNNNNCGTCACGSTYNNNNN)
1
0.85
Pax-3
chr12 93562615-93562624
-
891
V$NCX_01
caaCTTACca
(NNGTAAKTNG)
0.993
0.975
Ncx
chr12 93562707-93562716
-
983
V$NCX_01
caaCTTACta
(NNGTAAKTNG)
0.993
0.956
Ncx
chr12 93562793-93562802
+
1069
V$NCX_01
atGTAATtgt
(NNGTAAKTNG)
1
0.938
Ncx
chr12 93561944-93561958
+
220
V$CDPCR3_01
cattaactatTATTG
(CACCRATANNTATBG)
0.996
0.827
CDP
chr12 93561911-93561919
+
187
V$RFX_Q6
atGTTGCct
(SHGTTGCSN)
1
0.975
RFX
chr12 93562664-93562671
+
940
V$CACD_01
ccaCTCCC
(CCACRCCC)
0.948
0.965
CACD
chr12 93562643-93562663
+
919
V$PPARG_01
ctccaGGACAgaggtcagttt
(NNWGRGGTCAAAGGTCANNNN)
0.792
0.8
PPARgamma:RXRalpha
chr12 93562901-93562910
-
1177
V$POU3F2_02
attatCATCA
(TTATGYTAAT)
0.783
0.855
POU3F2
chr12 93562849-93562867
-
1125
V$PAX2_01
gcactcacgcTTGACacaa
(NNNNGTCANGNRTKANNNN)
0.979
0.929
Pax-2
chr12 93562418-93562422
-
694
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr12 93562421-93562425
-
697
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr12 93562845-93562849
-
1121
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr12 93562415-93562429
+
691
V$CP2_02
GCTGGtggtggccgg
(GCTGGNTNGNNCYNG)
1
0.905
CP2/LBP-1c/LSF
chr12 93562462-93562491
+
738
V$PAX4_04
ACAAAgtacagctcgaaaaacacacaccgc
(RAAAAWTANNNNNNNNNNNNNNNYCACNCC)
0.936
0.847
Pax-4
chr12 93562817-93562837
-
1093
V$PAX4_01
accacagaacaCTTGAagata
(NGNVGTCANGCGTGNNSNNYN)
0.986
0.78
Pax-4
chr12 93562847-93562867
-
1123
V$PAX4_01
tggcactcacgCTTGAcacaa
(NGNVGTCANGCGTGNNSNNYN)
0.986
0.885
Pax-4
chr12 93562848-93562868
+
1124
V$PAX4_01
ggcacTCACGcttgacacaag
(NGNVGTCANGCGTGNNSNNYN)
0.977
0.822
Pax-4
chr12 93562148-93562168
+
424
V$PAX6_01
gtgatTCATGgttctcttcct
(NNNNTTCACGCWTGANTKNNN)
0.842
0.745
Pax-6
chr12 93562578-93562598
-
854
V$PAX6_01
aacaaatcaccGGTGAaaacg
(NNNNTTCACGCWTGANTKNNN)
0.722
0.77
Pax-6
chr12 93562847-93562867
-
1123
V$PAX6_01
tggcactcacgCTTGAcacaa
(NNNNTTCACGCWTGANTKNNN)
0.832
0.809
Pax-6
chr12 93562848-93562868
+
1124
V$PAX6_01
ggcacTCACGcttgacacaag
(NNNNTTCACGCWTGANTKNNN)
1
0.806
Pax-6
chr12 93562778-93562790
-
1054
V$OCT1_03
tggtcATTACtca
(NNNRTAATNANNN)
1
0.993
Oct-1
chr12 93562779-93562790
-
1055
V$IPF1_Q4
ggtCATTActca
(GHNNTAATGACM)
1
0.911
IPF1
chr12 93562530-93562559
+
806
V$HOX13_01
tgagacactcacCATTAttcattctcttta
(TGCNHNNWYCCYCATTAKTNNDNNMNHYCN)
1
0.885
HOXA5
chr12 93562173-93562184
+
449
V$PAX4_03
tcttgtCACCCt
(NNNNNYCACCCB)
1
0.941
Pax-4
chr12 93562408-93562419
-
684
V$PAX4_03
cGGGTGagctgg
(NNNNNYCACCCB)
1
0.963
Pax-4
chr12 93562213-93562218
-
489
V$OG2_01
cAATTA
(TAATTR)
1
1
OG-2
chr12 93562796-93562801
+
1072
V$OG2_01
TAATTg
(TAATTR)
1
1
OG-2
chr12 93562126-93562133
+
402
V$GEN_INI3_B
cctCATTC
(CNNCANTN)
1
1
GEN_INI
chr12 93562754-93562781
-
1030
V$PAX5_01
cagcatcctcttcttCACTGcctttggt
(BCNNNRNGCANBGNTGNRTAGCSGCHNB)
1
0.823
Pax-5
chr12 93562846-93562873
-
1122
V$PAX5_02
gtggcactcaCGCTTgacacaagtttta
(RRMSWGANWYCTNRAGCGKRACSRYNSM)
1
0.747
Pax-5
chr12 93562694-93562704
-
970
V$SREBP1_01
agcATGTGatc
(NATCACGTGAY)
0.921
0.908
SREBP-1
chr12 93562872-93562887
+
1148
V$TAL1BETAE47_01
tacttCAGATgttaga
(NNNAACAGATGKTNNN)
1
0.928
Tal-1beta:E47
chr12 93562647-93562659
-
923
V$COUP_DR1_Q6
aggacagAGGTCa
(TGACCTTTGACCC)
1
0.935
COUP
chr12 93562620-93562629
+
896
V$NKX25_Q5
tacCACTTca
(TSYCACTTSM)
1
0.984
Nkx2-5
chr12 93562684-93562698
+
960
V$SZF11_01
cCAGGGagtaagcat
(CCAGGGTAWCAGCNG)
1
0.849
SZF1-1
chr12 93562181-93562189
+
457
V$WT1_Q6
cCCTCCtcc
(SMCNCCNSC)
1
0.995
WT1
chr12 93562661-93562674
-
937
V$P300_01
tttccACTCCccct
(NNNGGGAGTNNNNS)
1
0.972
p300
chr12 93562390-93562405
+
666
V$CETS1P54_03
tacagCGGATgtgaca
(NNNRCCGGAWRYNNNN)
0.988
0.957
c-Ets-1
chr12 93561946-93561959
-
222
V$FOXJ2_02
ttaactATTATtgt
(AYMATAATATTTKN)
1
0.942
FOXJ2
chr12 93562474-93562487
+
750
V$FAC1_01
tcgaAAAACacaca
(NNNCAMAACACRNA)
0.978
0.929
FAC1
chr12 93562572-93562585
+
848
V$FAC1_01
gaacAAAACaaatc
(NNNCAMAACACRNA)
0.978
0.933
FAC1
chr12 93562647-93562659
-
923
V$PPAR_DR1_Q2
aggacagAGGTCa
(TGACCTTTGNCCY)
1
0.971
PPAR
chr12 93562213-93562220
-
489
V$NKX25_02
cAATTAag
(CWTAATTG)
1
1
Nkx2-5