miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Targets





Basic TFBS information


chrcoordsinatesstrand (relative)position (relative)
motif
sequence (consensus)
matscorecorescore
TF name
chr16 14310026-14310034
+
279
V$ZIC2_01
gggGGGGTc
(KGGGTGGTC)
0.903
0.934
Zic2
chr16 14311013-14311021
+
1266
V$ZIC2_01
tggGGGGTt
(KGGGTGGTC)
0.903
0.881
Zic2
chr16 14311026-14311034
+
1279
V$ZIC2_01
gggGAGGTa
(KGGGTGGTC)
0.889
0.877
Zic2
chr16 14311967-14311975
-
2220
V$ZIC2_01
aACCACcct
(KGGGTGGTC)
1
0.934
Zic2
chr16 14312006-14312014
-
2259
V$ZIC2_01
cACCCCccc
(KGGGTGGTC)
0.903
0.897
Zic2
chr16 14312264-14312272
+
2517
V$ZIC2_01
tggGGGGTg
(KGGGTGGTC)
0.903
0.888
Zic2
chr16 14312349-14312357
-
2602
V$ZIC2_01
cACCCCcca
(KGGGTGGTC)
0.903
0.888
Zic2
chr16 14309985-14309991
+
238
V$DBP_Q6
AGCACac
(AGCAHAC)
0.985
0.987
DBP
chr16 14310557-14310563
-
810
V$DBP_Q6
gtTTGCT
(AGCAHAC)
1
1
DBP
chr16 14311703-14311714
+
1956
V$SRY_02
ttaaACAAAaaa
(NWWAACAAWANN)
0.966
0.965
SRY
chr16 14311541-14311553
+
1794
V$XVENT1_01
gtctgATTTGcac
(SBNCTATTTGYSY)
1
0.894
Xvent-1
chr16 14311616-14311628
+
1869
V$XVENT1_01
cgctgATTTGtac
(SBNCTATTTGYSY)
1
0.901
Xvent-1
chr16 14310452-14310474
-
705
V$PPARG_02
agctgctgcactgAGACCtattt
(AAGTAGGTCACNGTGACCYACTT)
0.751
0.665
PPARgamma:RXRalpha,
chr16 14312053-14312075
+
2306
V$PPARG_02
tttagGGTCAcgatgactcagca
(AAGTAGGTCACNGTGACCYACTT)
1
0.676
PPARgamma:RXRalpha,
chr16 14312053-14312075
-
2306
V$PPARG_02
tttagggtcacgaTGACTcagca
(AAGTAGGTCACNGTGACCYACTT)
0.751
0.692
PPARgamma:RXRalpha,
chr16 14310141-14310161
+
394
V$DR3_Q4
tttgcccctttTGCACcacca
(RRTGNMCYTNNTGAMCCNYNT)
0.907
0.831
VDR,
chr16 14310328-14310347
+
581
V$PPARA_01
gaagtttggggGAAACgtca
(CARAACTAGGNCAAAGGTCA)
0.6
0.732
PPARalpha:RXRalpha
chr16 14310553-14310572
-
806
V$PPARA_01
taaaGTTTGctctaactttg
(CARAACTAGGNCAAAGGTCA)
0.751
0.705
PPARalpha:RXRalpha
chr16 14311568-14311587
+
1821
V$PPARA_01
gcggcgccggcTAAAGgtga
(CARAACTAGGNCAAAGGTCA)
0.849
0.725
PPARalpha:RXRalpha
chr16 14311915-14311927
-
2168
V$TCF11_01
gctccagcATGAC
(GTCATNNWNNNNN)
1
0.999
TCF11
chr16 14311238-14311250
+
1491
V$STAT_Q6
aagggTTCTTgga
(NNNNNTTCTKGGA)
0.994
0.985
STAT
chr16 14311405-14311417
+
1658
V$STAT_Q6
tgggtTTCTGgga
(NNNNNTTCTKGGA)
1
0.993
STAT
chr16 14311464-14311478
-
1717
V$PAX8_01
tgTCACCcgggacaa
(NNNTNNNGNGTGANN)
0.963
0.924
Pax-8
chr16 14310335-14310355
-
588
V$PAX3_B
gggggaaaCGTCAcgtctcct
(NNNNNNCGTCACGSTYNNNNN)
0.904
0.883
Pax-3
chr16 14310337-14310357
+
590
V$PAX3_B
gggaaacgTCACGtctcctat
(NNNNNNCGTCACGSTYNNNNN)
1
0.864
Pax-3
chr16 14312052-14312072
+
2305
V$PAX3_B
ttttagggTCACGatgactca
(NNNNNNCGTCACGSTYNNNNN)
1
0.906
Pax-3
chr16 14311865-14311873
-
2118
V$CKROX_Q2
gggGAGGGg
(SCCCTCCCC)
1
1
CKROX
chr16 14310465-14310489
-
718
V$AIRE_02
agacctatttagccaattATTGAga
(GGTTATTAATTGGTTATATTGGTTD)
0.547
0.725
AIRE
chr16 14312234-14312248
+
2487
V$IRF_Q6
tgcggTTTCActttc
(BNCRSTTTCANTTYY)
1
0.993
IRF
chr16 14310472-14310487
+
725
V$S8_01
tttagccAATTAttga
(WNNANYYAATTANCNN)
1
0.993
S8
chr16 14309890-14309898
+
143
V$RFX_Q6
ctGTTGCcc
(SHGTTGCSN)
1
0.994
RFX
chr16 14310040-14310048
+
293
V$RFX_Q6
gtGTTGCcc
(SHGTTGCSN)
1
0.98
RFX
chr16 14311889-14311897
+
2142
V$RFX_Q6
gaGTTGCca
(SHGTTGCSN)
1
0.981
RFX
chr16 14312266-14312273
-
2519
V$CACD_01
GGGGGtgg
(CCACRCCC)
0.96
0.973
CACD
chr16 14312359-14312366
+
2612
V$CACD_01
ccaCCCCC
(CCACRCCC)
0.96
0.973
CACD
chr16 14311835-14311850
-
2088
V$NFKB_Q6_01
agggatTTTCCgcact
(NNNNKGGRAANTCCCN)
1
0.989
NF-kappaB
chr16 14310691-14310700
-
944
V$POU3F2_02
actatCATAA
(TTATGYTAAT)
1
0.855
POU3F2
chr16 14311684-14311697
+
1937
V$POU3F2_01
gtccatcaaTTGAT
(ATGMATWWATTCAT)
0.927
0.815
POU3F2
chr16 14312019-14312032
+
2272
V$POU3F2_01
ctgcattgaTCCAT
(ATGMATWWATTCAT)
0.755
0.844
POU3F2
chr16 14310419-14310433
-
672
V$PEBP_Q6
agatctGTGGTtttc
(GNTNACCACARANNK)
1
0.965
PEBP
chr16 14312281-14312292
+
2534
V$AP2_Q6
ccCCCGCtggcc
(MKCCCSCNGGCG)
1
0.94
AP-2
chr16 14311916-14311930
-
2169
V$OCT4_02
ctccagcatgACAAA
(ATTGWSWTGCWAAWN)
0.928
0.836
Oct-4
chr16 14311045-14311064
+
1298
V$MYCMAX_03
aaagaaaCAAGTgttacctg
(NNNNNNNCACGTGNNNNNNN)
0.8
0.835
c-Myc:Max
chr16 14311045-14311064
-
1298
V$MYCMAX_03
aaagaaacAAGTGttacctg
(NNNNNNNCACGTGNNNNNNN)
0.8
0.835
c-Myc:Max
chr16 14311142-14311151
+
1395
V$KAISO_01
ttCCTGCtag
(NTCCTGCNAN)
1
1
KAISO
chr16 14311504-14311522
+
1757
V$PAX2_01
gctcCTCAGgcatgaaacc
(NNNNGTCANGNRTKANNNN)
0.81
0.858
Pax-2
chr16 14311913-14311931
-
2166
V$PAX2_01
gggctccagcATGACaaaa
(NNNNGTCANGNRTKANNNN)
0.991
0.875
Pax-2
chr16 14309993-14309997
+
246
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14310128-14310132
+
381
V$KID3_01
CCACG
(CCACN)
1
1
Kid3
chr16 14310156-14310160
+
409
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14311375-14311379
-
1628
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr16 14311498-14311502
+
1751
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14311872-14311876
-
2125
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr16 14311969-14311973
+
2222
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14312163-14312167
+
2416
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14312262-14312266
-
2515
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr16 14312269-14312273
-
2522
V$KID3_01
GGTGG
(CCACN)
1
1
Kid3
chr16 14312355-14312359
+
2608
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14312359-14312363
+
2612
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14312417-14312421
+
2670
V$KID3_01
CCACC
(CCACN)
1
1
Kid3
chr16 14312310-14312330
+
2563
V$MINI19_B
agaggcctgCAGACagctgcc
(NNNNGVCNCCAYNCMRSNGSM)
0.938
0.916
Muscle
chr16 14311412-14311426
-
1665
V$CP2_02
ctgggatcagCCAGG
(GCTGGNTNGNNCYNG)
0.941
0.915
CP2/LBP-1c/LSF
chr16 14310886-14310915
+
1139
V$PAX4_04
AAAAAttgaaagacgccatgcgcagacact
(RAAAAWTANNNNNNNNNNNNNNNYCACNCC)
1
0.827
Pax-4
chr16 14311656-14311685
-
1909
V$PAX4_04
agggtcgggagacaggggcccttttTTTGT
(RAAAAWTANNNNNNNNNNNNNNNYCACNCC)
0.936
0.82
Pax-4
chr16 14310108-14310128
-
361
V$PAX4_01
gggattacaggCGTGAgcccc
(NGNVGTCANGCGTGNNSNNYN)
0.977
0.836
Pax-4
chr16 14311365-14311385
+
1618
V$PAX4_01
ggaatTCATGggtggggagac
(NGNVGTCANGCGTGNNSNNYN)
1
0.896
Pax-4
chr16 14311503-14311523
-
1756
V$PAX4_01
agctcctcaggCATGAaacct
(NGNVGTCANGCGTGNNSNNYN)
1
0.856
Pax-4
chr16 14311992-14312012
-
2245
V$PAX4_01
ccactgggaccCCTCAccccc
(NGNVGTCANGCGTGNNSNNYN)
0.881
0.823
Pax-4
chr16 14312435-14312455
+
2688
V$PAX4_01
ggaccTCAAGtgagaaaagcc
(NGNVGTCANGCGTGNNSNNYN)
0.986
0.8
Pax-4
chr16 14310275-14310286
+
528
V$TBX5_01
ggaGGTGTtgaa
(NNAGGTGTNANN)
1
0.974
TBX5
chr16 14309924-14309944
-
177
V$PAX6_01
gctcactgcagCCTGAacttc
(NNNNTTCACGCWTGANTKNNN)
0.818
0.769
Pax-6
chr16 14310278-14310298
+
531
V$PAX6_01
ggtgtTGAAGgataacttaga
(NNNNTTCACGCWTGANTKNNN)
0.757
0.787
Pax-6
chr16 14311503-14311523
-
1756
V$PAX6_01
agctcctcaggCATGAaacct
(NNNNTTCACGCWTGANTKNNN)
0.842
0.781
Pax-6
chr16 14311779-14311799
-
2032
V$PAX6_01
agaaagtcgtgTGTAAagttt
(NNNNTTCACGCWTGANTKNNN)
0.688
0.742
Pax-6
chr16 14311110-14311138
-
1363
V$MYOGNF1_01
ccttggcaggggGCCCTggggcagtcctg
(CRSCTGTBBNNTTTGGCACBSNGCCARCH)
0.668
0.723
myogenin
chr16 14311942-14311970
+
2195
V$MYOGNF1_01
cacatcttccttTTGGGggtcgggaaacc
(CRSCTGTBBNNTTTGGCACBSNGCCARCH)
0.911
0.734
myogenin
chr16 14311339-14311351
+
1592
V$OCT1_03
aagGTAATaatat
(NNNRTAATNANNN)
1
0.994
Oct-1
chr16 14311822-14311833
+
2075
V$HFH1_01
tcttGTTTAtct
(NATTGTTTATWT)
1
0.944
HFH1
chr16 14310290-14310319
-
543
V$HOX13_01
taacttagatcatTAATGagggtctggaac
(TGCNHNNWYCCYCATTAKTNNDNNMNHYCN)
1
0.845
HOXA5
chr16 14311373-14311384
-
1626
V$PAX4_03
tGGGTGgggaga
(NNNNNYCACCCB)
1
0.958
Pax-4
chr16 14311461-14311472
+
1714
V$PAX4_03
ctgtgtCACCCg
(NNNNNYCACCCB)
1
0.953
Pax-4
chr16 14311870-14311881
-
2123
V$PAX4_03
gGGGTGggggga
(NNNNNYCACCCB)
1
0.985
Pax-4
chr16 14311964-14311975
+
2217
V$PAX4_03
ggaaacCACCCt
(NNNNNYCACCCB)
1
0.969
Pax-4
chr16 14312000-14312011
+
2253
V$PAX4_03
acccctCACCCc
(NNNNNYCACCCB)
1
0.967
Pax-4
chr16 14312260-14312271
-
2513
V$PAX4_03
gGGGTGgggggt
(NNNNNYCACCCB)
1
0.987
Pax-4
chr16 14312267-14312278
-
2520
V$PAX4_03
gGGGTGgcagcg
(NNNNNYCACCCB)
1
0.973
Pax-4
chr16 14312350-14312361
+
2603
V$PAX4_03
acccccCACCCa
(NNNNNYCACCCB)
1
0.958
Pax-4
chr16 14312354-14312365
+
2607
V$PAX4_03
cccaccCACCCc
(NNNNNYCACCCB)
1
0.985
Pax-4
chr16 14310476-14310486
-
729
V$PAX4_02
gccAATTAttg
(NAAWAATTANS)
1
0.962
Pax-4
chr16 14310885-14310895
+
1138
V$PAX4_02
gaaAAATTgaa
(NAAWAATTANS)
0.987
0.945
Pax-4
chr16 14311586-14311596
-
1839
V$PAX4_02
gaaAATTAttc
(NAAWAATTANS)
1
0.962
Pax-4
chr16 14311865-14311872
+
2118
V$MAZ_Q6
gGGGAGgg
(GGGGAGGG)
1
1
MAZ
chr16 14310618-14310629
-
871
V$GABP_B
accaCTTCCtgc
(VCCGGAAGNGCR)
1
0.927
GABP
chr16 14310478-14310483
-
731
V$OG2_01
cAATTA
(TAATTR)
1
1
OG-2
chr16 14310019-14310032
+
272
V$SP3_Q3
agacttggGGGGGg
(ASMCTTGGGSRGGG)
0.981
0.986
Sp3
chr16 14310180-14310193
-
433
V$SP3_Q3
cCCTACccaagcct
(ASMCTTGGGSRGGG)
0.944
0.957
Sp3
chr16 14311368-14311381
+
1621
V$SP3_Q3
attcatggGTGGGg
(ASMCTTGGGSRGGG)
0.925
0.902
Sp3
chr16 14312255-14312268
+
2508
V$SP3_Q3
atcatgggGTGGGg
(ASMCTTGGGSRGGG)
0.925
0.898
Sp3
chr16 14310653-14310660
-
906
V$GEN_INI3_B
AAATGagg
(CNNCANTN)
0.997
0.997
GEN_INI
chr16 14311185-14311192
+
1438
V$GEN_INI3_B
cctCAGTT
(CNNCANTN)
0.993
0.994
GEN_INI
chr16 14311363-14311390
+
1616
V$PAX5_01
gaggaattCATGGgtggggagacggcag
(BCNNNRNGCANBGNTGNRTAGCSGCHNB)
0.987
0.849
Pax-5
chr16 14311381-14311408
-
1634
V$PAX5_01
gagacggcagcccagCACTGagcctggg
(BCNNNRNGCANBGNTGNRTAGCSGCHNB)
1
0.894
Pax-5
chr16 14311962-14311989
-
2215
V$PAX5_01
cgggaaaccacccttCCCTGctcaccga
(BCNNNRNGCANBGNTGNRTAGCSGCHNB)
0.988
0.857
Pax-5
chr16 14311553-14311580
+
1806
V$PAX5_02
catctctgattttAAGCGgcgccggcta
(RRMSWGANWYCTNRAGCGKRACSRYNSM)
1
0.748
Pax-5
chr16 14312065-14312072
-
2318
V$AP1_Q4_01
aTGACTca
(TGAGTCAN)
1
1
AP-1
chr16 14312439-14312449
-
2692
V$SREBP1_01
ctcAAGTGaga
(NATCACGTGAY)
0.913
0.886
SREBP-1
chr16 14310771-14310788
+
1024
V$RFX1_02
gagttcctccaGCAACtc
(NNGTNRCNATRGYAACNN)
1
0.924
RFX1
chr16 14310771-14310788
-
1024
V$RFX1_02
gaGTTCCtccagcaactc
(NNGTNRCNATRGYAACNN)
0.982
0.939
RFX1
chr16 14310992-14311010
-
1245
V$CMAF_01
catcagcgtCAGCAtttgc
(NWNNNTGCTGACKNNNNNN)
1
0.98
c-Maf
chr16 14312437-14312448
+
2690
V$TTF1_Q6
accTCAAGtgag
(NNNNCAAGNRNN)
1
0.988
TTF-1
chr16 14311011-14311025
+
1264
V$SPZ1_01
tctGGGGGgttgtag
(DNNGGRGGGWWNNNN)
0.998
0.965
Spz1
chr16 14312002-14312016
-
2255
V$SPZ1_01
ccctcacCCCCCcac
(DNNGGRGGGWWNNNN)
0.998
0.978
Spz1
chr16 14312070-14312084
-
2323
V$SPZ1_01
tcagcacCCTCCttt
(DNNGGRGGGWWNNNN)
1
0.961
Spz1
chr16 14312345-14312359
-
2598
V$SPZ1_01
aacgcacCCCCCacc
(DNNGGRGGGWWNNNN)
0.998
0.971
Spz1
chr16 14312352-14312366
-
2605
V$SPZ1_01
cccccacCCACCccc
(DNNGGRGGGWWNNNN)
0.989
0.971
Spz1
chr16 14311016-14311030
+
1269
V$VDR_Q3
GGGGTtgtaggggga
(GGGKNARNRRGGWSA)
0.947
0.912
VDR
chr16 14311876-14311890
+
2129
V$VDR_Q3
GGGGGagatggggga
(GGGKNARNRRGGWSA)
0.956
0.94
VDR
chr16 14312350-14312364
-
2603
V$VDR_Q3
accccccaccCACCC
(GGGKNARNRRGGWSA)
1
0.904
VDR
chr16 14310334-14310348
-
587
V$TAXCREB_02
tgggggaaaCGTCAc
(RTGACGCATAYCCCC)
1
0.754
Tax/CREB
chr16 14312065-14312079
+
2318
V$TAXCREB_02
aTGACTcagcaccct
(RTGACGCATAYCCCC)
0.8
0.767
Tax/CREB
chr16 14312343-14312357
+
2596
V$TAXCREB_02
aGAACGcacccccca
(RTGACGCATAYCCCC)
0.6
0.73
Tax/CREB
chr16 14310115-14310129
-
368
V$TAXCREB_01
caggCGTGAgccccc
(GGGGGTTGACGYANA)
0.88
0.881
Tax/CREB
chr16 14310619-14310628
+
872
V$TEL2_Q6
ccACTTCctg
(YTACTTCCTG)
1
0.953
Tel-2
chr16 14312208-14312218
-
2461
V$PAX_Q6
atcagtCCCAG
(CTGGAACTMAC)
0.9
0.829
Pax
chr16 14310617-14310626
+
870
V$NKX25_Q5
tacCACTTcc
(TSYCACTTSM)
1
0.975
Nkx2-5
chr16 14312239-14312248
+
2492
V$NKX25_Q5
tttCACTTtc
(TSYCACTTSM)
1
0.949
Nkx2-5
chr16 14312440-14312449
-
2693
V$NKX25_Q5
tcAAGTGaga
(TSYCACTTSM)
1
0.991
Nkx2-5
chr16 14312065-14312075
-
2318
V$MAF_Q6_01
aTGACTcagca
(NGCTGAGTCAN)
1
1
MAF
chr16 14312274-14312286
-
2527
V$ZF5_B
caGCGGGcccccg
(NRNGNGCGCGCWN)
0.819
0.87
ZF5
chr16 14312342-14312354
-
2595
V$ZF5_B
caGAACGcacccc
(NRNGNGCGCGCWN)
0.841
0.869
ZF5
chr16 14310833-14310847
-
1086
V$SZF11_01
cttctgggtCCCTGg
(CCAGGGTAWCAGCNG)
1
0.85
SZF1-1
chr16 14312055-14312073
-
2308
V$ER_Q6
tagGGTCAcgatgactcag
(NNARGNCANNNTGACCYNN)
1
0.947
ER
chr16 14312358-14312366
+
2611
V$WT1_Q6
cCCACCccc
(SMCNCCNSC)
0.992
0.993
WT1
chr16 14310044-14310059
+
297
V$GRE_C
tgcccaggctGTTCTc
(GGTACAANNTGTYCTK)
1
0.861
GR
chr16 14312010-14312023
-
2263
V$P300_01
cccccACTCCtgca
(NNNGGGAGTNNNNS)
1
0.973
p300
chr16 14310995-14311006
-
1248
V$CREB_02
cagCGTCAgcat
(NNGNTGACGTNN)
1
0.958
CREB
chr16 14310057-14310065
+
310
V$PAX2_02
ctcAAACTc
(NNNAAASNN)
1
0.999
Pax-2
chr16 14310810-14310818
+
1063
V$PAX2_02
cccAAACTc
(NNNAAASNN)
1
0.998
Pax-2
chr16 14311406-14311414
-
1659
V$PAX2_02
gGGTTTctg
(NNNAAASNN)
0.999
0.998
Pax-2
chr16 14310305-14310320
+
558
V$HAND1E47_01
atgagggTCTGGaaca
(NNNNGNRTCTGGMWTT)
1
0.968
Hand1:E47
chr16 14311404-14311419
+
1657
V$HAND1E47_01
ctgggttTCTGGgatc
(NNNNGNRTCTGGMWTT)
1
0.936
Hand1:E47
chr16 14311118-14311126
-
1371
V$LRF_Q2
GGGGGccct
(VNNRMCCCC)
1
1
LRF
chr16 14312277-14312285
+
2530
V$LRF_Q2
cgggCCCCC
(VNNRMCCCC)
1
0.995
LRF
chr16 14311475-14311486
-
1728
V$AP1_Q2_01
acaagtgAGTCA
(TGACTCANNSKN)
1
0.986
AP-1
chr16 14311733-14311746
-
1986
V$FOXJ2_02
aaaaatATTAAgca
(AYMATAATATTTKN)
0.871
0.879
FOXJ2
chr16 14311110-14311126
-
1363
V$NF1_Q6_01
ccTTGGCagggggccct
(NTGGNNNNNNGCCAANN)
1
0.982
NF-1
chr16 14310205-14310218
-
458
V$FAC1_01
tccgtGTTGTggaa
(NNNCAMAACACRNA)
1
0.982
FAC1
chr16 14311718-14311731
-
1971
V$FAC1_01
tgggtGTTTTggaa
(NNNCAMAACACRNA)
0.978
0.954
FAC1
chr16 14312229-14312244
+
2482
V$CBF_02
ccaactGCGGTttcac
(NNNNNTGYGGTYNNNN)
1
0.99
CBF
chr16 14311575-14311587
-
1828
V$PPAR_DR1_Q2
cggctaaAGGTGa
(TGACCTTTGNCCY)
0.851
0.853
PPAR