miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Targets





Basic TFBS information


chrcoordsinatesstrand (relative)position (relative)
motif
sequence (consensus)
matscorecorescore
TF name
chr21 16884219-16884230
-
142
V$SRY_02
TGCATTGTTTCT
(NWWAACAAWANN)
1
0.972
SRY
chr21 16884146-16884168
+
69
V$PPARG_02
TAGAAGCAGATTTTAACCCATGT
(AAGTAGGTCACNGTGACCYACTT)
0.526
0.678
PPARgamma:RXRalpha,
chr21 16884376-16884385
+
299
V$NCX_01
CTGTAATTTC
(NNGTAAKTNG)
1
0.941
Ncx
chr21 16884291-16884319
-
214
V$PLZF_02
GCTCATCCTAACTTTTATATATCATATAT
(KTNNWTNGNNGNTAAAGYTTKATYWGTTC)
0.978
0.802
PLZF
chr21 16884199-16884219
+
122
V$PAX6_01
ACTCTTAACTGTTCATTGTCT
(NNNNTTCACGCWTGANTKNNN)
0.665
0.749
Pax-6
chr21 16884278-16884290
-
201
V$OCT1_03
TCGTGATTACTCA
(NNNRTAATNANNN)
1
0.995
Oct-1
chr21 16884228-16884257
+
151
V$HOX13_01
TCTCATATTCTTCATTATTTTAAGGTCTGG
(TGCNHNNWYCCYCATTAKTNNDNNMNHYCN)
1
0.86
HOXA5
chr21 16884270-16884299
+
193
V$HOX13_01
AATGGTCGTCGTGATTACTCAGCTCATCCT
(TGCNHNNWYCCYCATTAKTNNDNNMNHYCN)
0.931
0.807
HOXA5
chr21 16884120-16884147
-
43
V$PAX5_02
GCTATGGTGTTGCTGTACAAATCTGCTA
(RRMSWGANWYCTNRAGCGKRACSRYNSM)
0.657
0.754
Pax-5
chr21 16884254-16884268
+
177
V$TST1_01
CTGGAATTAGTCTAT
(NNKGAATTAVAVTDN)
1
0.919
Tst-1
chr21 16884373-16884387
-
296
V$TST1_01
CAACTGTAATTTCTA
(NNKGAATTAVAVTDN)
0.926
0.94
Tst-1
chr21 16884218-16884231
-
141
V$SOX9_B1
CTGCATTGTTTCTC
(NNNNAACAATRGNN)
1
0.955
SOX9
chr21 16884266-16884272
-
189
V$CDXA_02
TATAAAT
(AWTWMTR)
1
1
CdxA
chr21 16884246-16884261
+
169
V$HAND1E47_01
TTTAAGGTCTGGAATT
(NNNNGNRTCTGGMWTT)
1
0.964
Hand1:E47