Parental gene:

SLC25A3, ENSACAG00000013232

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:5:29319391..29334070(-)


>ENSACAG00000013232
ATGTTCTCGTCCATTGCGCCGCTAGTGCGGCTGAACCCATTCCACGCTCCTCATCTGCAGCTGCAGCAGGAGGGCCTCGG
GCTGAGGAAGCGCCCGGCGGAGCCTGAGGAGGTCTCGTGTCCCCGGCGGAGCCTGGCAGCCGCCTCCGCAGAGGAAGAAT
ACAGTTGTGAATATGGATCACTCAAGTTTTATGCTCTCTGTGGCTTTGGAGGAATCCTAAGTTGTGGTCTGACACACACA
GCAGTCGTACCTTTGGATTTAGTGAAGTGCCGCATTCAGGTGGATCCACAAAAATATAAGAGCATATTCAATGGATTTTC
AGTTACTGTCAAAGAAGATGGTGTTCGTGGCTTGGCCAAGGGATGGGCCCCAACCTTTATTGGATATTCCATGCAAGGAC
TCTGCAAATTTGGTTTCTATGAAGTATTCAAAATCCTCTATGGAAATTTATTGGGAGAGGAAAATACTTACTTGTGGCGT
ACATCACTGTACTTGGCCGCATCTGCCAGTGCAGAGTTCTTTGCTGATATTGCTTTGGCTCCAATGGAAGCTGCTAAGGT
TCGCATTCAAACGCAGCCTGGGTATGCTAACACATTGCGGCAAGCAGCTCCAAAAATGTTTGCAGAAGAAGGTATTTGGG
CTTTCTACAAAGGTGTTGCACCATTATGGATGAGGCAGATTCCATATACAATGATGAAGTTTGCCTGCTTTGAACGAACT
GTGGAAGCTCTTTACAAACATGTTGTCCCCAAACCAAGGAGTGAATGTTCCAAAGGAGAACAGCTGGTTGTAACATTTGT
AGCAGGCTATATTGCTGGTGTCTTCTGTGCCATTGTCTCACATCCTGCTGATTCTGTGGTATCTGTGCTGAATAAAGAAA
AGGGCAGTTCAGCTATGGAAGTGCTGAAGAGGCTGGGAATTAAAGGTGTATGGAAGGGACTGTTTGCACGTATTATTATG
ATTGGCACCCTGACAGCATTGCAGTGGTTCATCTATGATTCCGTGAAGGTATATTTCAGGCTTCCCCGTCCACCTCCACC
TGAGATGCCAGAATCTTTGAAGAAAAAACTTGGGCTTACAGAGTAG

Library Parental gene expression (RPM)
SRP009831_adrenal 598 .08 RPM
SRP009831_brain 375 .17 RPM
SRP009831_dewlap 236 .25 RPM
SRP009831_embryo 680 .08 RPM
SRP009831_heart 918 .37 RPM
SRP009831_liver 431 .03 RPM
SRP009831_lung 235 .24 RPM
SRP009831_ovary 194 .20 RPM
SRP009831_skeletal_muscle 288 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000012890 ortholog_one2one 1 retrogene
retro_btau_172,
Canis familiaris ENSCAFG00000006545 ortholog_one2many 1 retrogene
retro_cfam_880,
Callithrix jacchus ENSCJAG00000002392 ortholog_one2one 2 retrogenes
retro_cjac_3315, retro_cjac_812,
Dipodomys ordii ENSDORG00000011431 ortholog_one2one 1 retrogene
retro_dord_321,
Equus caballus ENSECAG00000015135 ortholog_one2one 1 retrogene
retro_ecab_481,
Echinops telfairi ENSETEG00000012678 ortholog_one2one 1 retrogene
retro_etel_1748,
Homo sapiens ENSG00000075415 ortholog_one2one 1 retrogene
retro_hsap_392,
Gorilla gorilla ENSGGOG00000015886 ortholog_one2one 1 retrogene
retro_ggor_394,
Latimeria chalumnae ENSLACG00000007024 ortholog_one2one 1 retrogene
retro_lcha_4,
Macropus eugenii ENSMEUG00000016593 ortholog_one2one 2 retrogenes
retro_meug_405, retro_meug_658,
Microcebus murinus ENSMICG00000003520 ortholog_one2one 1 retrogene
retro_mmur_298,
Myotis lucifugus ENSMLUG00000008330 ortholog_one2one 1 retrogene
retro_mluc_1184,
Macaca mulatta ENSMMUG00000023036 ortholog_one2one 1 retrogene
retro_mmul_496,
Monodelphis domestica ENSMODG00000007717 ortholog_one2one 2 retrogenes
retro_mdom_2026, retro_mdom_293,
Mus musculus ENSMUSG00000061904 ortholog_one2one 1 retrogene
retro_mmus_1959,
Nomascus leucogenys ENSNLEG00000005973 ortholog_one2one 1 retrogene
retro_nleu_2402,
Oryctolagus cuniculus ENSOCUG00000011847 ortholog_one2one 1 retrogene
retro_ocun_390,
Otolemur garnettii ENSOGAG00000012222 ortholog_one2one 2 retrogenes
retro_ogar_1816, retro_ogar_2052,
Pongo abelii ENSPPYG00000004858 ortholog_one2one 1 retrogene
retro_pabe_1768,
Pan troglodytes ENSPTRG00000005333 ortholog_one2one 1 retrogene
retro_ptro_302,
Pteropus vampyrus ENSPVAG00000005890 ortholog_one2one 1 retrogene
retro_pvam_212,
Sorex araneus ENSSARG00000001149 ortholog_one2one 1 retrogene
retro_sara_262,
Ictidomys tridecemlineatus ENSSTOG00000027633 ortholog_one2one 2 retrogenes
retro_itri_485, retro_itri_90,
Tupaia belangeri ENSTBEG00000014548 ortholog_one2one 1 retrogene
retro_tbel_1792,
Tursiops truncatus ENSTTRG00000004739 ortholog_one2one 1 retrogene
retro_ttru_692,
Vicugna pacos ENSVPAG00000004704 ortholog_one2one 1 retrogene
retro_vpac_455,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_35 80.07 84.76
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSACAG00000013232 retrocopies