Parental gene:

ENSCAFG00000006545

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:15:37989555..37999460(+)


>ENSCAFG00000006545
ATGTTCTCGTCCGTGGCGCATCTGGCGCGGGCGAACCCCTTCAACGCGCCGCACCTGCTGCTGGTTCAGGATGGCTTGAC
GGGCCCCCGCAGCAACCCCGCGGGGCCCCCGGGCCCGCCCCGCCGTTCCCGCAATCTGGCGGCAGCCGCTGTGGAAGAGT
ACAGTTGCGAATATGGCTCCATGAAGTTTTATGCACTGTGTGGCTTTGGTGGGGTCTTAAGTTGTGGTCTGACACACACT
GCTGTCGTTCCTCTGGATTTAGTGAAATGCCGTATGCAGGTGGACCCCCAAAAGTACAAGGGCATATTTAATGGATTCTC
AGTTACACTTAAAGAGGATGGTGTTCGTGGTTTGGCTAAAGGATGGGCTCCGACTTTCATTGGCTATTCTATGCAAGGGC
TCTGCAAGTTTGGCTTTTATGAAGTTTTCAAAGTCTTGTATAGCAACATGCTTGGAGAGGAGAATGCCTATCTCTGGCGC
ACATCACTATATTTGGCTGCCTCTGCCAGTGCTGAATTCTTTGCTGACATTGCCCTGGCTCCTATGGAAGCTGCTAAGGT
TAGAATTCAAACCCAGCCAGGTTATGCCAACACCTTGAGGGATGCAGCTCCCAAAATGTATAAGGAAGAAGGCTTAAAAG
CATTCTACAAGGGGGTTGCTCCTCTCTGGATGAGACAGATACCATACACCATGATGAAATTTGCCTGCTTTGAACGTACT
GTTGAAGCATTATATAAGTTTGTGGTTCCCAAGCCCCGAAGTGAATGTTCAAAGGCAGAGCAACTGGTTGTAACATTTGT
AGCAGGTTATATAGCTGGAGTCTTCTGTGCAATTGTTTCTCATCCTGCTGATTCTGTGGTATCTGTGTTGAATAAAGAGA
AAGGTAGCAGTGCTTCTCAAGTCCTTCAGAGACTCGGATTTAAAGGTGTATGGAAGGGACTCTTTGCTCGTATCATCATG
ATTGGCACTCTGACTGCACTACAGTGGTTCATCTATGACTCTGTGAAGGTCTACTTCAGGCTCCCTCGCCCACCTCCACC
TGAAATGCCAGAGTCTCTGAAGAAGAAGCTTGGGTTAACTCAGTAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 225 .53 RPM
SRP017611_brain 198 .88 RPM
SRP017611_kidney 651 .13 RPM
SRP017611_liver 126 .68 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000013232 ortholog_one2many 1 retrogene
retro_acar_35,
Bos taurus ENSBTAG00000012890 ortholog_one2many 1 retrogene
retro_btau_172,
Callithrix jacchus ENSCJAG00000002392 ortholog_one2many 2 retrogenes
retro_cjac_3315, retro_cjac_812,
Dipodomys ordii ENSDORG00000011431 ortholog_one2many 1 retrogene
retro_dord_321,
Equus caballus ENSECAG00000015135 ortholog_one2many 1 retrogene
retro_ecab_481,
Echinops telfairi ENSETEG00000012678 ortholog_one2many 1 retrogene
retro_etel_1748,
Homo sapiens ENSG00000075415 ortholog_one2many 1 retrogene
retro_hsap_392,
Gorilla gorilla ENSGGOG00000015886 ortholog_one2many 1 retrogene
retro_ggor_394,
Latimeria chalumnae ENSLACG00000007024 ortholog_one2many 1 retrogene
retro_lcha_4,
Macropus eugenii ENSMEUG00000016593 ortholog_one2many 2 retrogenes
retro_meug_405, retro_meug_658,
Microcebus murinus ENSMICG00000003520 ortholog_one2many 1 retrogene
retro_mmur_298,
Myotis lucifugus ENSMLUG00000008330 ortholog_one2many 1 retrogene
retro_mluc_1184,
Macaca mulatta ENSMMUG00000023036 ortholog_one2many 1 retrogene
retro_mmul_496,
Monodelphis domestica ENSMODG00000007717 ortholog_one2many 2 retrogenes
retro_mdom_2026, retro_mdom_293,
Mus musculus ENSMUSG00000061904 ortholog_one2many 1 retrogene
retro_mmus_1959,
Nomascus leucogenys ENSNLEG00000005973 ortholog_one2many 1 retrogene
retro_nleu_2402,
Oryctolagus cuniculus ENSOCUG00000011847 ortholog_one2many 1 retrogene
retro_ocun_390,
Otolemur garnettii ENSOGAG00000012222 ortholog_one2many 2 retrogenes
retro_ogar_1816, retro_ogar_2052,
Pongo abelii ENSPPYG00000004858 ortholog_one2many 1 retrogene
retro_pabe_1768,
Pan troglodytes ENSPTRG00000005333 ortholog_one2many 1 retrogene
retro_ptro_302,
Pteropus vampyrus ENSPVAG00000005890 ortholog_one2many 1 retrogene
retro_pvam_212,
Sorex araneus ENSSARG00000001149 ortholog_one2many 1 retrogene
retro_sara_262,
Ictidomys tridecemlineatus ENSSTOG00000027633 ortholog_one2many 2 retrogenes
retro_itri_485, retro_itri_90,
Tupaia belangeri ENSTBEG00000014548 ortholog_one2many 1 retrogene
retro_tbel_1792,
Tursiops truncatus ENSTTRG00000004739 ortholog_one2many 1 retrogene
retro_ttru_692,
Vicugna pacos ENSVPAG00000004704 ortholog_one2many 1 retrogene
retro_vpac_455,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_880 98.11 72.85
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Download FASTA sequences of all ENSCAFG00000006545 retrocopies