Parental gene: | SUCLA2, ENSACAG00000014610 |
| Aliases: | None |
| Description: | succinate-CoA ligase, ADP-forming, beta subunit [Source:HGNC Symbol;Acc:11448] |
| Organism: | Anole lizard (Anolis carolinensis) |
| Coordinates: | 1:136997506..137023480(+) |
>ENSACAG00000014610
ATGGAGGGCCCGTGTTGTGGCATGCGTCGGCGCATGCGTATTGCGAGCGGGGCAAACTTGCCTGAGCCGAAGGGCCGGGG
AGGAAGGAGGCTTGTCATGGCCGCCTCCATGATGTGTTCGCGGGTGGTGACAGCGGCCGCCAGGCAGCTGAGGGGATATC
AAGGAGGGCGCGCGAGCCTCGCGGCCAAGATTCTCAGTGGAAGTCCTGGTTTGCTTAGCAATCATGCATTTCAAATTGAG
CAGCGAAGGAACTTGTCATTGCATGAATATCTGAGTATGGAACTACTGAAAGAAGCTGGAATTTCTGTTCCACATGGATT
AGTTGCAAATACACCAGAGGACGCTTATAACGTTGCCAAACAAATAGGTACAAAAGACCTTGTTGTGAAGGCACAAGTTT
TAGCTGGTGGCAGAGGAAAAGGAACATTTGAAGGTGGTCTAAAAGGAGGAGTGAAAATAGTCTTTTCTCCAGAAGAAGCA
CGAGAGATTTCCTCAAGAATGATTGGGAAAAAGCTATTCACAAAGCAGACGGGAGAAAAGGGCAGGATATGCAATCAAGT
ATTTATCTGTGAGCGCAGATATCCCAGAAGAGAGTACTATTTTGCAATAACCATGGAACGATCATTTCAGGGCCCTGTAC
TCATTGGCAGCGCTCAAGGTGGTGTCAATATTGAAGATGTGGCTGCAGAGAATCCTGATGCTATTGCCAAGGAACCAGTT
GACATTGTGGAAGGCATCCAGAAGGAACAAGCTATCAGGCTGGCCAAGAAAATGGGATTTCCTGCTAATTTAGTAAATGA
AGCAGCTGAAAATATGATTAAGATCTACAACCTCTTTATTAAATTTGATGCCACAATGGTAGAAATTAACCCCATGGTTG
AAGATTCCACAGGGATTGTGATGTGTATGGACGCAAAGATAAACTTTGATAGCAATTCAGCTTATCGTCAGCAGAAAATC
TTCAGCTTGCAAGACTGGACCCAAGAAGATGACAGAGACAGGGATGCAGCAAAGTCTGATCTTAATTATATAGGATTAGA
TGGCAGCATTGGATGTCTGGTAAATGGTGCTGGTCTTGCAATGGCCACCATGGATATAATTAAACTTCATGGAGGCACTC
CAGCAAATTTTCTTGATGTCGGTGGTGGTGCTACAGCGCAGCGGGTGACTGAGGCCTTTAGACTTATTACTTCAGATAAA
AAGGTGCAGGCAATTTTGGTAAATATTTTTGGAGGCATTATGCGGTGTGATGTGATTGCACAAGGTATAATCATGGCAGT
AAAAGATTTGGAACTAAAAATACCTATTGTTGTACGGTTACAAGGTACACGAGTTGATGATGCCAAAGCTTTAATAACAG
ACAGTGGTCTGAAAATACTTGCTTGTGATGATTTGGATGAAGCTGCTAAAATGGTTGTGAAACTCTCTGAAATAGTGACC
TTAGCAAAGCAGGCGCAAGTGGATGTTAAGTTTCAGTTACCAATCTGA
ATGGAGGGCCCGTGTTGTGGCATGCGTCGGCGCATGCGTATTGCGAGCGGGGCAAACTTGCCTGAGCCGAAGGGCCGGGG
AGGAAGGAGGCTTGTCATGGCCGCCTCCATGATGTGTTCGCGGGTGGTGACAGCGGCCGCCAGGCAGCTGAGGGGATATC
AAGGAGGGCGCGCGAGCCTCGCGGCCAAGATTCTCAGTGGAAGTCCTGGTTTGCTTAGCAATCATGCATTTCAAATTGAG
CAGCGAAGGAACTTGTCATTGCATGAATATCTGAGTATGGAACTACTGAAAGAAGCTGGAATTTCTGTTCCACATGGATT
AGTTGCAAATACACCAGAGGACGCTTATAACGTTGCCAAACAAATAGGTACAAAAGACCTTGTTGTGAAGGCACAAGTTT
TAGCTGGTGGCAGAGGAAAAGGAACATTTGAAGGTGGTCTAAAAGGAGGAGTGAAAATAGTCTTTTCTCCAGAAGAAGCA
CGAGAGATTTCCTCAAGAATGATTGGGAAAAAGCTATTCACAAAGCAGACGGGAGAAAAGGGCAGGATATGCAATCAAGT
ATTTATCTGTGAGCGCAGATATCCCAGAAGAGAGTACTATTTTGCAATAACCATGGAACGATCATTTCAGGGCCCTGTAC
TCATTGGCAGCGCTCAAGGTGGTGTCAATATTGAAGATGTGGCTGCAGAGAATCCTGATGCTATTGCCAAGGAACCAGTT
GACATTGTGGAAGGCATCCAGAAGGAACAAGCTATCAGGCTGGCCAAGAAAATGGGATTTCCTGCTAATTTAGTAAATGA
AGCAGCTGAAAATATGATTAAGATCTACAACCTCTTTATTAAATTTGATGCCACAATGGTAGAAATTAACCCCATGGTTG
AAGATTCCACAGGGATTGTGATGTGTATGGACGCAAAGATAAACTTTGATAGCAATTCAGCTTATCGTCAGCAGAAAATC
TTCAGCTTGCAAGACTGGACCCAAGAAGATGACAGAGACAGGGATGCAGCAAAGTCTGATCTTAATTATATAGGATTAGA
TGGCAGCATTGGATGTCTGGTAAATGGTGCTGGTCTTGCAATGGCCACCATGGATATAATTAAACTTCATGGAGGCACTC
CAGCAAATTTTCTTGATGTCGGTGGTGGTGCTACAGCGCAGCGGGTGACTGAGGCCTTTAGACTTATTACTTCAGATAAA
AAGGTGCAGGCAATTTTGGTAAATATTTTTGGAGGCATTATGCGGTGTGATGTGATTGCACAAGGTATAATCATGGCAGT
AAAAGATTTGGAACTAAAAATACCTATTGTTGTACGGTTACAAGGTACACGAGTTGATGATGCCAAAGCTTTAATAACAG
ACAGTGGTCTGAAAATACTTGCTTGTGATGATTTGGATGAAGCTGCTAAAATGGTTGTGAAACTCTCTGAAATAGTGACC
TTAGCAAAGCAGGCGCAAGTGGATGTTAAGTTTCAGTTACCAATCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP009831_adrenal | 84 .75 RPM |
| SRP009831_brain | 130 .52 RPM |
| SRP009831_dewlap | 27 .59 RPM |
| SRP009831_embryo | 98 .07 RPM |
| SRP009831_heart | 217 .02 RPM |
| SRP009831_liver | 55 .10 RPM |
| SRP009831_lung | 58 .18 RPM |
| SRP009831_ovary | 15 .67 RPM |
| SRP009831_skeletal_muscle | 127 .44 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000009278 | ortholog_one2many | 2 retrogenes | |
| Cavia porcellus | ENSCPOG00000014961 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000136143 | ortholog_one2one | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008224 | ortholog_one2one | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000007539 | ortholog_one2many | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000001488 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002948 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007452 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000005352 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000005859 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_acar_26 | 75.06 | 87.47 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_acar_52 | 74.89 | 88.08 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSACAG00000014610 retrocopies