Parental gene: | NUDT21, ENSBTAG00000010207 |
| Aliases: | None |
| Description: | Cleavage and polyadenylation specificity factor subunit 5 [Source:UniProtKB/Swiss-Prot;Acc:Q3ZCA2] |
| Organism: | Cow (Bos taurus) |
| Coordinates: | 18:24267848..24282456(+) |
>ENSBTAG00000010207
ATGTCCGTGGTGCCGCCCAATCGCTCGCAGACCGGCTGGCCCCGGGGAGTCACCCAGTTCGGCAACAAGTATATCCAGCA
GACCAAGCCCCTCACCCTGGAGCGCACCATCAACCTGTACCCTCTTACCAATTACACTTTTGGTACAAAAGAACCCCTCT
ATGAGAAGGACAGCTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAATTTGATAAAATTGGCATGAGGAGGACTGTA
GAAGGGGTTTTGATTGTCCATGAGCACCGGCTACCCCATGTGTTACTGCTACAGCTGGGAACAACGTTCTTCAAATTACC
TGGTGGTGAGCTTAATCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATATTGGGTCGTCAAGATG
GAGTCCTGCAAGACTGGGTTATCGATGACTGCATTGGCAACTGGTGGAGACCAAATTTTGAGCCTCCTCAGTATCCATAT
ATTCCTGCACATATTACAAAACCTAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
CCCTAAAAATTACAAGCTGGTAGCTGCACCGCTATTTGAACTGTATGACAATGCACCTGGATATGGACCCATCATTTCTA
GTCTCCCCCAGCTTTTGAGCAGGTTCAATTTTATATACAACTGA
ATGTCCGTGGTGCCGCCCAATCGCTCGCAGACCGGCTGGCCCCGGGGAGTCACCCAGTTCGGCAACAAGTATATCCAGCA
GACCAAGCCCCTCACCCTGGAGCGCACCATCAACCTGTACCCTCTTACCAATTACACTTTTGGTACAAAAGAACCCCTCT
ATGAGAAGGACAGCTCTGTTGCAGCCAGATTTCAGCGCATGAGGGAGGAATTTGATAAAATTGGCATGAGGAGGACTGTA
GAAGGGGTTTTGATTGTCCATGAGCACCGGCTACCCCATGTGTTACTGCTACAGCTGGGAACAACGTTCTTCAAATTACC
TGGTGGTGAGCTTAATCCAGGAGAAGATGAAGTTGAAGGACTAAAACGCTTAATGACAGAGATATTGGGTCGTCAAGATG
GAGTCCTGCAAGACTGGGTTATCGATGACTGCATTGGCAACTGGTGGAGACCAAATTTTGAGCCTCCTCAGTATCCATAT
ATTCCTGCACATATTACAAAACCTAAGGAACATAAGAAGTTGTTTCTGGTTCAGCTTCAAGAGAAAGCCTTGTTTGCAGT
CCCTAAAAATTACAAGCTGGTAGCTGCACCGCTATTTGAACTGTATGACAATGCACCTGGATATGGACCCATCATTTCTA
GTCTCCCCCAGCTTTTGAGCAGGTTCAATTTTATATACAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 14 .30 RPM |
| SRP017611_kidney | 21 .46 RPM |
| SRP017611_liver | 6 .87 RPM |
| ERP005899_muscle | 18 .69 RPM |
| ERP005899_liver | 6 .49 RPM |
| SRP030211_testis | 27 .03 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000012724 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000028465 | possible_ortholog | 1 retrogene | |
| Mustela putorius furo | ENSMPUG00000003451 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000001963 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000017224 | possible_ortholog | 2 retrogenes | |
| Sorex araneus | ENSSARG00000006493 | ortholog_one2one | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000029848 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_btau_937 | 88.70 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_btau_1655 | 95.24 | 55.51 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSBTAG00000010207 retrocopies