Parental gene:

EIF2S1, ENSBTAG00000016311

Aliases:None
Description:Eukaryotic translation initiation factor 2 subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:P68102]
Organism:Cow (Bos taurus)
Coordinates:10:79600114..79620580(+)


>ENSBTAG00000016311
ATGCCAGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTGGAAGATGTAGTGATGGTGAATGTAAGGTCCAT
TGCTGAAATGGGCGCTTATGTCAGCTTGCTGGAATACAACAACATCGAAGGCATGATTCTTCTGAGTGAGTTGTCAAGAA
GGCGTATCCGTTCTATAAACAAACTCATCCGAATTGGCAGGAATGAATGTGTGGTTGTTATTAGAGTGGACAAAGAAAAA
GGATATATTGATTTGTCAAAAAGAAGAGTTTCACCAGAGGAAGCAATCAAATGTGAAGATAAATTTACCAAATCCAAAAC
TGTTTACAGCATTCTTCGTCATGTTGCTGAGGTCTTAGAATATACCAAGGATGAGCAGCTGGAAAGCCTATTCCAGAGGA
CTGCCTGGGTCTTCGATGACAAGTACAAGAGACCCGGATATGGTGCCTATGATGCATTTAAGCACGCAGTCTCAGACCCA
TCTATTTTGGATAGCTTAGATTTGAATGAAGATGAACGTGAAGTACTCATTAACAATATTAATAGGCGTTTGACCCCCCA
GGCTGTCAAAATTCGAGCAGATATTGAAGTGGCTTGTTATGGTTATGAAGGCATCGATGCCGTAAAAGAAGCTCTGAGAG
CGGGTTTGAATTGTTCTACAGAAACCATGCCCATCAAAATTAATCTAATAGCTCCTCCTCGGTATGTAATGACTACAACC
ACCCTGGAGAGAACAGAAGGCCTCTCTGTCCTCAATCAAGCTATGGCTGTTATAAAAGAAAAAATTGAGGAAAAGAGGGG
TGTCTTCAATGTTCAAATGGAGCCCAAAGTGGTCACAGATACAGATGAGACCGAACTTGCAAGGCAGCTGGAGAGGCTTG
AGAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA

Library Parental gene expression (RPM)
ERP005899_liver 4 .18 RPM
ERP005899_muscle 17 .16 RPM
SRP017611_brain 7 .40 RPM
SRP017611_kidney 9 .25 RPM
SRP017611_liver 6 .87 RPM
SRP030211_testis 28 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000015368 ortholog_one2one 1 retrogene
retro_cjac_2067,
Cavia porcellus ENSCPOG00000003313 ortholog_one2one 1 retrogene
retro_cpor_1146,
Echinops telfairi ENSETEG00000019003 ortholog_one2one 1 retrogene
retro_etel_279,
Monodelphis domestica ENSMODG00000009911 ortholog_one2one 1 retrogene
retro_mdom_1754,
Mus musculus ENSMUSG00000021116 ortholog_one2one 4 retrogenes
retro_mmus_1342, retro_mmus_1927, retro_mmus_1960, retro_mmus_728,
Oryctolagus cuniculus ENSOCUG00000012023 ortholog_one2one 1 retrogene
retro_ocun_1677,
Rattus norvegicus ENSRNOG00000009432 ortholog_one2one 3 retrogenes
retro_rnor_1234, retro_rnor_1423, retro_rnor_2218,
Sarcophilus harrisii ENSSHAG00000009815 ortholog_one2one 1 retrogene
retro_shar_560,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_1191 99.37 100.00
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Download FASTA sequences of all ENSBTAG00000016311 retrocopies