Parental gene: | Eif2s1, ENSRNOG00000009432 |
| Aliases: | None |
| Description: | Eukaryotic translation initiation factor 2 subunit 1 [Source:UniProtKB/Swiss-Prot;Acc:P68101] |
| Organism: | Rat (Rattus norvegicus) |
| Coordinates: | 6:111422339..111447066(+) |
>ENSRNOG00000009432
ATGCCGGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTCGAAGATGTAGTGATGGTGAATGTAAGATCCAT
TGCTGAAATGGGGGCCTATGTCAGCTTGTTGGAATATAATAACATTGAAGGCATGATTCTTCTTAGTGAATTATCCAGAC
GACGTATCCGTTCTATAAACAAACTGATCCGAATTGGCAGAAATGAATGTGTAGTTGTCATTAGAGTGGATAAAGAAAAA
GGATATATAGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCAATCAAATGTGAAGACAAATTCACAAAATCCAAAAC
TGTTTATAGCATTCTTCGCCATGTTGCTGAGGTATTAGAGTATACCAAGGATGAGCAGCTGGAAAGCCTATTCCAGAGGA
CTGCCTGGGTCTTTGATGACAAGTACAAGAGACCTGGATATGGTGCCTATGATGCCTTTAAGCATGCAGTCTCAGACCCA
TCTATCTTGGATAGTTTAGATTTGAATGAAGATGAAAGAGAAGTACTCATTAACAATATCAATAGGCGTTTGACCCCACA
AGCTGTCAAGATTCGAGCAGATATTGAAGTAGCTTGCTATGGTTACGAAGGCATTGATGCTGTAAAAGAAGCCCTGAGAG
CAGGTTTGAATTGTTCTACAGAAACCATGCCCATCAAGATTAATCTAATAGCTCCACCCAGGTATGTGATGACAACAACG
ACCCTAGAGAGGACAGAAGGACTCTCTGTTCTCAATCAGGCTATGGCAGTCATCAAAGAAAAGATTGAGGAGAAGAGGGG
AGTGTTCAATGTTCAGATGGAGCCCAAAGTGGTTACAGATACAGATGAGACTGAACTTGCAAGGCAGCTGGAACGGCTTG
AGAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA
ATGCCGGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTCGAAGATGTAGTGATGGTGAATGTAAGATCCAT
TGCTGAAATGGGGGCCTATGTCAGCTTGTTGGAATATAATAACATTGAAGGCATGATTCTTCTTAGTGAATTATCCAGAC
GACGTATCCGTTCTATAAACAAACTGATCCGAATTGGCAGAAATGAATGTGTAGTTGTCATTAGAGTGGATAAAGAAAAA
GGATATATAGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCAATCAAATGTGAAGACAAATTCACAAAATCCAAAAC
TGTTTATAGCATTCTTCGCCATGTTGCTGAGGTATTAGAGTATACCAAGGATGAGCAGCTGGAAAGCCTATTCCAGAGGA
CTGCCTGGGTCTTTGATGACAAGTACAAGAGACCTGGATATGGTGCCTATGATGCCTTTAAGCATGCAGTCTCAGACCCA
TCTATCTTGGATAGTTTAGATTTGAATGAAGATGAAAGAGAAGTACTCATTAACAATATCAATAGGCGTTTGACCCCACA
AGCTGTCAAGATTCGAGCAGATATTGAAGTAGCTTGCTATGGTTACGAAGGCATTGATGCTGTAAAAGAAGCCCTGAGAG
CAGGTTTGAATTGTTCTACAGAAACCATGCCCATCAAGATTAATCTAATAGCTCCACCCAGGTATGTGATGACAACAACG
ACCCTAGAGAGGACAGAAGGACTCTCTGTTCTCAATCAGGCTATGGCAGTCATCAAAGAAAAGATTGAGGAGAAGAGGGG
AGTGTTCAATGTTCAGATGGAGCCCAAAGTGGTTACAGATACAGATGAGACTGAACTTGCAAGGCAGCTGGAACGGCTTG
AGAGAGAAAATGCAGAAGTGGATGGAGATGATGATGCAGAAGAAATGGAAGCCAAAGCTGAAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 19 .36 RPM |
| SRP017611_kidney | 31 .89 RPM |
| SRP017611_brain | 27 .75 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000016311 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015368 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000003313 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019003 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009911 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021116 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000012023 | ortholog_one2one | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000009815 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_rnor_1234 | 91.93 | 70.48 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_rnor_1423 | 92.43 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_rnor_2218 | 84.83 | 91.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSRNOG00000009432 retrocopies