Parental gene:

EIF2S1, ENSOCUG00000012023

Aliases:None
Description:eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:20:4901007..4927649(-)


>ENSOCUG00000012023
ATGCCAGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAGGTGGAAGATGTAGTGATGGTGAATGTAAGATCCAT
TGCTGAAATGGGGGCTTACGTCAGCTTGTTGGAATACAACAACATTGAAGGCATGATTCTTCTCAGTGAATTATCCAGGA
GGCGTATTCGTTCCATAAACAAACTCATCCGAATCGGCAGGAATGAATGTGTGGTTGTCATTAGAGTGGACAAAGAAAAA
GGATATATTGACTTGTCCAAAAGAAGAGTTTCTCCGGAGGAGGCAATCAAATGTGAAGACAAATTCACAAAATCTAAAAC
TGTGTATAGCATTCTTCGTCATGTTGCTGAGGTGTTAGAATACACCAAGGATGAGCAACTGGAAAGCCTGTTCCAGAGAA
CTGCGTGGGTCTTTGATGATAAGTACAAGAGACCTGGATACGGTGCCTACGATGCGTTTAAACATGCAGTATCAGATCCA
TCTATTTTGGATAGTTTAGATTTGAATGAAGATGAACGGGAAGTACTCATTAATAATATTAATAGGCGTTTGACCCCACA
GGCTGTGAAAATTCGAGCAGATATTGAAGTGGCGTGTTATGGTTATGAAGGCATTGATGCTGTGAAAGAAGCCCTGAGAG
CAGGTTTGAATTGTTCTACGGAAACCATGCCCATCAAAATTAATCTAATAGCTCCTCCTCGATACGTGATGACTACAACA
ACCCTAGAGAGAACAGAAGGTCTCTCTGTCCTCAATCAAGCTATGGCTGTTATCAAAGAGAAGATCGAGGAAAAGAGGGG
AGTGTTTAATGTTCAAATGGAGCCCAAAGTGGTCACAGATACAGATGAGACTGAACTTGCAAGGCAGCTGGAGAGGCTCG
AGAGAGAAAATGCGGAAGTGGATGGAGATGACGATGCAGAAGAAATGGAAGCGAAAGCTGAAGATTAA

Library Parental gene expression (RPM)
SRP017611_brain 35 .76 RPM
SRP017611_kidney 34 .46 RPM
SRP017611_liver 13 .87 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016311 ortholog_one2one 1 retrogene
retro_btau_1191,
Callithrix jacchus ENSCJAG00000015368 ortholog_one2one 1 retrogene
retro_cjac_2067,
Cavia porcellus ENSCPOG00000003313 ortholog_one2one 1 retrogene
retro_cpor_1146,
Echinops telfairi ENSETEG00000019003 ortholog_one2one 1 retrogene
retro_etel_279,
Monodelphis domestica ENSMODG00000009911 ortholog_one2one 1 retrogene
retro_mdom_1754,
Mus musculus ENSMUSG00000021116 ortholog_one2one 4 retrogenes
retro_mmus_1342, retro_mmus_1927, retro_mmus_1960, retro_mmus_728,
Rattus norvegicus ENSRNOG00000009432 ortholog_one2one 3 retrogenes
retro_rnor_1234, retro_rnor_1423, retro_rnor_2218,
Sarcophilus harrisii ENSSHAG00000009815 ortholog_one2one 1 retrogene
retro_shar_560,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1677 76.59 93.97
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Download FASTA sequences of all ENSOCUG00000012023 retrocopies