Parental gene: | EIF2S1, ENSCPOG00000003313 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_20:12085991..12096648(+) |
>ENSCPOG00000003313
ATGCCAGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAAGTGGAAGATGTAGTGATGGTGAACGTGAGGTCCAT
TGCTGAAATGGGAGCCTATGTCAGTTTGCTGGAATATAACAATATTGAAGGCATGATTCTTCTTAGTGAGTTATCCAGGA
GACGTATCCGTTCTATAAACAAACTCATTCGAATTGGCAGGAATGAATGTGTGGTTGTCATTAGAGTGGACAAAGAAAAA
GGATACATTGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCCATCAAATGTGAAGACAAATTCACAAAATCAAAAAC
TGTATATAGCATTCTTCGTCATGTTGCTGAGGTGTTAGAATACACCAAGGATGAGCAGCTGGAAAGCCTGTTCCAGAGGA
CTGCCTGGGTCTTCGATGACAAGTACAAGAGGCCTGGCTATGGTGCCTATGATGCATTTAAGCATGCAGTCTCAGATCCA
TCTATTTTGGATAGTTTAGATTTGAATGAAGATGAACGGGAGGTACTCATTAACAATATTAATAGGCGTCTGACCCCACA
AGCTGTCAAAATTCGAGCAGATATTGAAGTGGCTTGTTATGGCTATGAAGGCATTGATGCAGTGAAGGAGGCCCTGAGAG
CAGGTTTGAATTGCTCAACAGAGACCATGCCCATCAAGATTAATCTAATAGCTCCTCCTCGGTATGTGATGACAACAACA
ACCCTGGAGAGAACGGAAGGCCTCTCAGTTCTTAATCAAGCCATGGCTGTTATCAAAGAAAAGATTGAGGAAAAGAGGGG
TGTTTTCAATGTTCAAATGGAGCCCAAAGTGGTCACAGACACAGATGAGACTGAGCTCGCAAGGCAGCTGGAGAGGCTGG
AGAGAGAAAACGCAGAAGTGGATGGTGATGATGATGCTGAAGAAATGGAAGCCAAAGCTGAAGATTAA
ATGCCAGGTCTAAGTTGTAGATTTTATCAACACAAATTTCCTGAAGTGGAAGATGTAGTGATGGTGAACGTGAGGTCCAT
TGCTGAAATGGGAGCCTATGTCAGTTTGCTGGAATATAACAATATTGAAGGCATGATTCTTCTTAGTGAGTTATCCAGGA
GACGTATCCGTTCTATAAACAAACTCATTCGAATTGGCAGGAATGAATGTGTGGTTGTCATTAGAGTGGACAAAGAAAAA
GGATACATTGATTTGTCAAAAAGAAGAGTTTCTCCAGAGGAAGCCATCAAATGTGAAGACAAATTCACAAAATCAAAAAC
TGTATATAGCATTCTTCGTCATGTTGCTGAGGTGTTAGAATACACCAAGGATGAGCAGCTGGAAAGCCTGTTCCAGAGGA
CTGCCTGGGTCTTCGATGACAAGTACAAGAGGCCTGGCTATGGTGCCTATGATGCATTTAAGCATGCAGTCTCAGATCCA
TCTATTTTGGATAGTTTAGATTTGAATGAAGATGAACGGGAGGTACTCATTAACAATATTAATAGGCGTCTGACCCCACA
AGCTGTCAAAATTCGAGCAGATATTGAAGTGGCTTGTTATGGCTATGAAGGCATTGATGCAGTGAAGGAGGCCCTGAGAG
CAGGTTTGAATTGCTCAACAGAGACCATGCCCATCAAGATTAATCTAATAGCTCCTCCTCGGTATGTGATGACAACAACA
ACCCTGGAGAGAACGGAAGGCCTCTCAGTTCTTAATCAAGCCATGGCTGTTATCAAAGAAAAGATTGAGGAAAAGAGGGG
TGTTTTCAATGTTCAAATGGAGCCCAAAGTGGTCACAGACACAGATGAGACTGAGCTCGCAAGGCAGCTGGAGAGGCTGG
AGAGAGAAAACGCAGAAGTGGATGGTGATGATGATGCTGAAGAAATGGAAGCCAAAGCTGAAGATTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 26 .86 RPM |
| SRP017611_kidney | 36 .22 RPM |
| SRP017611_brain | 27 .84 RPM |
| SRP040447_lung | 27 .16 RPM |
| SRP040447_skeletal_muscle | 19 .17 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000016311 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000015368 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019003 | ortholog_one2one | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009911 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000021116 | ortholog_one2one | 4 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000012023 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000009432 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000009815 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_1146 | 74.75 | 94.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003313 retrocopies