Parental gene:

EIF2S1, ENSMODG00000009911

Aliases:None
Description:eukaryotic translation initiation factor 2, subunit 1 alpha, 35kDa [Source:HGNC Symbol;Acc:3265]
Organism:Opossum (Monodelphis domestica)
Coordinates:1:271569304..271589173(+)


>ENSMODG00000009911
ATGCCGGGACTAAGTTGTAGATTCTACCAGCACAAATTTCCTGAAGTAGAAGATGTGGTAATGGTGAATGTACGATCCAT
TGCTGAAATGGGAGCTTATGTCAGTCTATTGGAATACAACAATATTGAAGGCATGATTCTTCTTAGTGAGCTGTCTAGAA
GACGTATCCGCTCCATTAATAAACTCATCCGAATTGGCAGAAATGAATGTGTGGTTGTCATTAGAGTGGACAAAGAAAAA
GGCTATATTGATTTGTCAAAAAGAAGAGTTTCTCCAGAAGAAGCAATCAAATGTGAAGACAAATTCACCAAATCCAAAAC
TGTTTATAGCATTCTTCGCCATGTTGCTGAGGTGTTAGAGTACAGTAAAGATGAGCAGCTGGAAAGCCTGTTCCAGAGAA
CTGCCTGGGTCTTTGATGACAAATACAAGAGACCAGGATATGGTGCCTATGATGCATTTAAACATGCAGTCTCAGACCCT
TCAATTCTGGATGGGTTGGATTTGAATGAAGATGAGAGGCGAGTGCTTATTGATAACATAAATAGACGCCTGACACCACA
AGCTGTCAAAATTCGAGCTGATATTGAAGTGGCTTGTTATGGTTATGAGGGTATTGATGCTGTAAAAGAAGCTCTGAGAG
CAGGTTTGAATTGTTCCACAGAAAACATGCCCATCAAGATTAACCTAATAGCACCTCCTAGATATGTTATGACTACTACA
ACTCTAGAGAGAACAGAAGGACTCTCTGTTCTCAATCAGGCTATGGCTGTCATCAAAGAAAAGATTGAAGAAAAGAGGGG
TGTCTTCAATGTTCAAATGGAGCCCAAGGTGGTTACAGACACAGATGAAACTGAGCTTGCAAGACAACTGGAGAGGCTTG
AGAGGGAAAATGCTGAGGTGGATGGAGATGATGATGCTGAAGAAATGGAAGCCAAAGCTGAAGATTAA

Library Parental gene expression (RPM)
SRP007412_brain 107 .04 RPM
SRP007412_cerebellum 93 .69 RPM
SRP007412_heart 113 .23 RPM
SRP007412_kidney 190 .94 RPM
SRP007412_liver 136 .45 RPM
SRP007412_testis 605 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016311 ortholog_one2one 1 retrogene
retro_btau_1191,
Callithrix jacchus ENSCJAG00000015368 ortholog_one2one 1 retrogene
retro_cjac_2067,
Cavia porcellus ENSCPOG00000003313 ortholog_one2one 1 retrogene
retro_cpor_1146,
Echinops telfairi ENSETEG00000019003 ortholog_one2one 1 retrogene
retro_etel_279,
Mus musculus ENSMUSG00000021116 ortholog_one2one 4 retrogenes
retro_mmus_1342, retro_mmus_1927, retro_mmus_1960, retro_mmus_728,
Oryctolagus cuniculus ENSOCUG00000012023 ortholog_one2one 1 retrogene
retro_ocun_1677,
Rattus norvegicus ENSRNOG00000009432 ortholog_one2one 3 retrogenes
retro_rnor_1234, retro_rnor_1423, retro_rnor_2218,
Sarcophilus harrisii ENSSHAG00000009815 ortholog_one2one 1 retrogene
retro_shar_560,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mdom_1754 70.97 67.94
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Download FASTA sequences of all ENSMODG00000009911 retrocopies