Parental gene:

ENSCAFG00000000713

Aliases:EMC2, TTC35
Description:None
Organism:Dog (Canis familiaris)
Coordinates:13:9069813..9114218(+)


>ENSCAFG00000000713
ATGGCGAAGGTCTCAGAGCTTTACGATGTCACTTGGGAAGAAATGCGAGATAAAATGAGAAAATGGAGAGAAGAAAACTC
ACGAAACAGTGAGCAAATTGTGGAAGTTGGAGAGGAATTAATTAATGAATATGCTTCTAAGCTTGGAGATGATATTTGGA
TCATATATGAACAAGTGATGATTGCAGCCCTAGACTATGGTCGAGATGACTTGGCATTGTTTTGTCTTCAGGAGTTGAGA
AGACAGTTTCCTGGCAGCCACAGAGTCAAGAGACTAACAGGCATGAGATTTGAAGCCATGGAAAGATATGATGATGCTAT
ACAACTATATGATCGAATTTTACAAGAAGATCCAACTAACACTGCTGCAAGAAAGCGTAAGATTGCCATTCGAAAAGCCC
AGGGGAAAAATGTGGAGGCCATTCGGGAACTGAATGAGTATCTGGAACAATTTGTTGGGGACCAAGAAGCCTGGCATGAA
CTTGCAGAACTTTATATCAATGAACACGACTATGCTAAAGCAGCCTTTTGTTTAGAGGAGCTAATGATGACTAATCCACA
CAACCACTTATACTGTCAGCAGTATGCTGAAGTTAAATATACCCAAGGTGGACTTGAAAACCTCGAACTTTCAAGAAAGT
ATTTTGCGCAGGCACTGAAACTGAACAACAGAAATATGAGAGCTTTGTTTGGGCTTTACATGTCGGCAAGTCATATTGCT
TCTAATCCAAAAGCAAGTGCAAAAACAAAAAAGGACAACATGAAATATGCTAGTTGGGCAGCTAGTCAAATAAACAGAGC
TTATCAGTTTGCAGGTCGAAGTAAGAAGGAAACTAAATACTCTCTTAAGGCAGTTGAAGACATGTTGGAAACACTGCAGA
TCACCCAGTCTTAA

Library Parental gene expression (RPM)
SRP017611_brain 14 .93 RPM
SRP017611_kidney 22 .45 RPM
SRP017611_liver 6 .45 RPM
SRP012049_cerebellum 20 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012826 ortholog_one2many 1 retrogene
retro_amel_600,
Choloepus hoffmanni ENSCHOG00000011271 ortholog_one2many 3 retrogenes
retro_chof_1512, retro_chof_1990, retro_chof_851,
Callithrix jacchus ENSCJAG00000006437 ortholog_one2many 2 retrogenes
retro_cjac_3295, retro_cjac_3867,
Dasypus novemcinctus ENSDNOG00000013708 possible_ortholog 1 retrogene
retro_dnov_568,
Myotis lucifugus ENSMLUG00000013258 ortholog_one2many 2 retrogenes
retro_mluc_2369, retro_mluc_2452,
Mustela putorius furo ENSMPUG00000005915 ortholog_one2many 1 retrogene
retro_mputfur_1647,
Mus musculus ENSMUSG00000022337 ortholog_one2many 1 retrogene
retro_mmus_1262,
Oryctolagus cuniculus ENSOCUG00000002461 ortholog_one2many 1 retrogene
retro_ocun_1251,
Pongo abelii ENSPPYG00000018820 ortholog_one2many 1 retrogene
retro_pabe_1600,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_726 98.32 100.00
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Download FASTA sequences of all ENSCAFG00000000713 retrocopies