Parental gene:

ETF1, ENSCAFG00000001282

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:11:26080816..26110481(-)


>ENSCAFG00000001282
ATGGCGGACGACCCCAGTGCTGCCGACAGGAACGTGGAGATCTGGAAGATCAAGAAGCTCATCAAGAGCTTGGAGGCGGC
CCGCGGCAATGGCACAAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCAG
ATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAA
AGACTCAAACTTTATAACAAAGTACCTCCAAATGGCCTGGTTGTTTACTGTGGTACAATTGTAACAGAAGAAGGAAAGGA
AAAGAAAGTCAACATTGACTTTGAACCTTTTAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAG
AGGCTCTTACAGCACTACTTTCAGATGACAGCAAGTTTGGCTTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACA
CTCCAAGGAAACACAAGAGAAGTCTTGCACAAGTTCACTGTGGATCTCCCAAAGAAACATGGTAGAGGAGGTCAATCAGC
CTTGCGTTTTGCTCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGGAAAGTAGCTGAGACTGCTGTACAGCTGTTTA
TTTCTGGGGACAAAGTGAATGTGGCTGGTCTTGTTTTAGCTGGATCAGCGGACTTTAAAACTGAACTAAGTCAATCTGAT
ATGTTTGATCAGAGGTTGCAATCAAAAGTTTTAAAATTAGTTGATATTTCCTATGGTGGCGAAAATGGATTCAACCAAGC
TATTGAGTTATCTACTGAAGTCCTTTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAA
TCAGCCAGGACACGGGCAAGTACTGTTTTGGAGTTGAAGATACACTAAAGGCTTTAGAAATGGGAGCTGTAGAGATTCTA
ATAGTCTATGAAAATCTGGATATAATGAGATATGTTCTTCATTGCCAAGGCACAGAAGAAGAGAAAATTCTCTATCTAAC
TCCAGAACAAGAGAAGGATAAATCTCATTTCACAGACAAAGAGACAGGACAAGAACATGAGCTGATTGAGAGTATGCCCC
TGCTGGAGTGGTTTGCTAACAATTATAAAAAATTTGGAGCTACATTGGAAATTGTCACAGATAAGTCACAAGAAGGATCC
CAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGG
AGATGATGAATTTTTTGACCTTGATGACTACTAG

Library Parental gene expression (RPM)
SRP017611_brain 12 .94 RPM
SRP017611_kidney 17 .50 RPM
SRP017611_liver 8 .19 RPM
SRP012049_cerebellum 14 .74 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000006776 ortholog_one2many 2 retrogenes
retro_cjac_2316, retro_cjac_4133,
Dasypus novemcinctus ENSDNOG00000010830 ortholog_one2many 3 retrogenes
retro_dnov_1925, retro_dnov_2504, retro_dnov_610,
Equus caballus ENSECAG00000013041 ortholog_one2many 1 retrogene
retro_ecab_740,
Echinops telfairi ENSETEG00000007362 ortholog_one2many 2 retrogenes
retro_etel_1237, retro_etel_1400,
Gorilla gorilla ENSGGOG00000000657 ortholog_one2many 4 retrogenes
retro_ggor_2326, retro_ggor_2561, retro_ggor_2562, retro_ggor_2919,
Macaca mulatta ENSMMUG00000005871 ortholog_many2many 2 retrogenes
retro_mmul_1658, retro_mmul_718,
Mustela putorius furo ENSMPUG00000009338 ortholog_one2many 1 retrogene
retro_mputfur_1448,
Oryctolagus cuniculus ENSOCUG00000006650 ortholog_many2many 3 retrogenes
retro_ocun_1188, retro_ocun_1614, retro_ocun_462,
Rattus norvegicus ENSRNOG00000019450 ortholog_one2many 1 retrogene
retro_rnor_2935,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_99 100.00 100.00
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Download FASTA sequences of all ENSCAFG00000001282 retrocopies