Parental gene:

MMU.778, ENSMMUG00000005871

Aliases:None
Description:eukaryotic peptide chain release factor subunit 1 [Source:RefSeq peptide;Acc:NP_001253403]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:6:134924273..134962313(-)


>ENSMMUG00000005871
ATGGCGGACGACCCCAGTGCTGCCGACAGGAACGTGGAGATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGC
CCGCGGCAATGGCACCAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCACGAGTGGCAAAAATGTTAGCAG
ATGAGTTTGGAACTGCATCTAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAA
AGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTTGTATACTGTGGAACAATTGTAACAGAAGAAGGAAAGGA
AAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAG
AGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGATTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACA
CTCCAAGGAAACACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACACGGTAGAGGAGGTCAATCAGC
CTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACATAACTATGTTCGGAAAGTAGCAGAGACTGCTGTGCAGCTGTTTA
TTTCTGGGGACAAAGTGAATGTGGCTGGTCTAGTTTTAGCTGGATCTGCTGACTTTAAAACTGAACTAAGTCAATCTGAT
ATGTTTGATCAGAGGTTACAATCAAAAGTTTTAAAATTAGTTGATATATCCTATGGTGGTGAAAATGGATTCAACCAAGC
TATTGAGTTATCTACTGAAGTCCTCTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGGACGATACTTCGATGAAA
TCAGCCAGGACACGGGCAAGTACTGTTTTGGTGTTGAAGATACACTAAAGGCTTTGGAAATGGGAGCTGTAGAAATTCTA
ATAGTCTATGAAAATCTGGATATAATGAGATATGTTCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTCTATCTAAC
TCCAGAGCAAGAAAAGGATAAATCTCATTTCACAGACAAAGAGACCGGACAGGAACATGAGCTTATCGAGAGTATGCCCC
TGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACGTTGGAAATTGTCACAGATAAATCACAAGAAGGGTCT
CAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATACCAAGGAGG
AGACGATGAATTTTTTGACCTTGATGACTACTAG

Library Parental gene expression (RPM)
SRP007412_brain 67 .12 RPM
SRP007412_brain_prefrontal_cortex 53 .07 RPM
SRP007412_cerebellum 56 .44 RPM
SRP007412_heart 79 .08 RPM
SRP007412_kidney 75 .70 RPM
SRP007412_liver 34 .00 RPM
SRP007412_testis 107 .61 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000001282 ortholog_many2many 1 retrogene
retro_cfam_99,
Callithrix jacchus ENSCJAG00000006776 possible_ortholog 2 retrogenes
retro_cjac_2316, retro_cjac_4133,
Dasypus novemcinctus ENSDNOG00000010830 ortholog_one2many 3 retrogenes
retro_dnov_1925, retro_dnov_2504, retro_dnov_610,
Equus caballus ENSECAG00000013041 ortholog_one2many 1 retrogene
retro_ecab_740,
Echinops telfairi ENSETEG00000007362 ortholog_one2many 2 retrogenes
retro_etel_1237, retro_etel_1400,
Gorilla gorilla ENSGGOG00000000657 possible_ortholog 4 retrogenes
retro_ggor_2326, retro_ggor_2561, retro_ggor_2562, retro_ggor_2919,
Mustela putorius furo ENSMPUG00000009338 ortholog_one2many 1 retrogene
retro_mputfur_1448,
Oryctolagus cuniculus ENSOCUG00000006650 ortholog_many2many 3 retrogenes
retro_ocun_1188, retro_ocun_1614, retro_ocun_462,
Rattus norvegicus ENSRNOG00000019450 ortholog_one2many 1 retrogene
retro_rnor_2935,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_718 86.67 58.35
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2. retro_mmul_1658 81.53 85.13
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Download FASTA sequences of all ENSMMUG00000005871 retrocopies