Parental gene: | ETF1, ENSOCUG00000006650 |
| Aliases: | ETF1, ERF1 |
| Description: | eukaryotic translation termination factor 1 (ETF1), mRNA [Source:RefSeq mRNA;Acc:NM_001082767] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 3:20770474..20803894(-) |
>ENSOCUG00000006650
ATGGCGGACGACCCCAGTGCTGCCGACAGGAACGTGGAAATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGC
CCGCGGCAATGGCACCAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCCCGAGTGGCAAAAATGTTAGCAG
ATGAATTTGGAACTGCATCCAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAA
AGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTTGTTTACTGTGGAACAATTGTAACAGAAGAAGGAAAGGA
AAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAG
AGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGCTTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACA
CTGCAGGGAAATACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACACGGTAGAGGAGGTCAGTCAGC
CTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACACAACTATGTTCGGAAAGTAGCAGAGACTGCTGTACAGCTGTTTA
TTTCTGGGGACAAAGTGAATGTGGCTGGTCTCGTTTTAGCTGGATCAGCTGACTTTAAAACTGAACTAAGTCAATCTGAT
ATGTTTGACCAGAGGTTGCAATCAAAAGTTTTAAAATTAGTTGATATATCCTATGGCGGTGAAAATGGATTCAACCAAGC
TATTGAGTTATCTACTGAGGTCCTCTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAA
TCAGTCAAGACACGGGCAAGTACTGTTTTGGAGTTGAAGATACGCTAAAAGCTTTGGAAATGGGAGCCGTAGAAATTCTA
ATAGTCTATGAAAATTTGGATATAATGAGATACGTTCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTTTACCTAAC
TCCAGAACAAGAGAAGGATAAATCTCATTTCACAGACAAAGAGACAGGACAGGAACATGAGCTGATTGAGAGCATGCCCC
TGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACATTGGAAATTGTCACAGATAAGTCACAAGAAGGATCC
CAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATATCAAGGAGG
AGACGATGAATTTTTTGACCTTGATGACTACTAG
ATGGCGGACGACCCCAGTGCTGCCGACAGGAACGTGGAAATCTGGAAGATCAAGAAGCTCATTAAGAGCTTGGAGGCGGC
CCGCGGCAATGGCACCAGCATGATATCATTGATCATTCCTCCCAAAGACCAGATTTCCCGAGTGGCAAAAATGTTAGCAG
ATGAATTTGGAACTGCATCCAACATTAAGTCACGAGTAAACCGCCTTTCAGTCCTGGGAGCCATTACATCTGTACAACAA
AGACTCAAACTTTATAACAAAGTACCTCCAAATGGTCTGGTTGTTTACTGTGGAACAATTGTAACAGAAGAAGGAAAGGA
AAAGAAAGTCAACATTGACTTTGAACCTTTCAAACCAATTAATACGTCATTGTATTTGTGTGACAACAAATTCCATACAG
AGGCTCTTACAGCACTACTTTCAGATGATAGCAAGTTTGGCTTCATTGTAATAGATGGTAGTGGTGCACTTTTTGGCACA
CTGCAGGGAAATACAAGAGAAGTCCTGCACAAATTCACTGTGGATCTCCCAAAGAAACACGGTAGAGGAGGTCAGTCAGC
CTTGCGTTTTGCCCGTTTAAGAATGGAAAAGCGACACAACTATGTTCGGAAAGTAGCAGAGACTGCTGTACAGCTGTTTA
TTTCTGGGGACAAAGTGAATGTGGCTGGTCTCGTTTTAGCTGGATCAGCTGACTTTAAAACTGAACTAAGTCAATCTGAT
ATGTTTGACCAGAGGTTGCAATCAAAAGTTTTAAAATTAGTTGATATATCCTATGGCGGTGAAAATGGATTCAACCAAGC
TATTGAGTTATCTACTGAGGTCCTCTCCAACGTGAAATTCATTCAAGAGAAGAAATTAATAGGACGATACTTTGATGAAA
TCAGTCAAGACACGGGCAAGTACTGTTTTGGAGTTGAAGATACGCTAAAAGCTTTGGAAATGGGAGCCGTAGAAATTCTA
ATAGTCTATGAAAATTTGGATATAATGAGATACGTTCTTCATTGCCAAGGCACAGAAGAGGAGAAAATTCTTTACCTAAC
TCCAGAACAAGAGAAGGATAAATCTCATTTCACAGACAAAGAGACAGGACAGGAACATGAGCTGATTGAGAGCATGCCCC
TGTTGGAATGGTTTGCTAACAACTATAAAAAATTTGGAGCTACATTGGAAATTGTCACAGATAAGTCACAAGAAGGATCC
CAGTTTGTGAAAGGATTTGGTGGAATTGGAGGTATCTTGCGGTACCGAGTAGATTTCCAGGGAATGGAATATCAAGGAGG
AGACGATGAATTTTTTGACCTTGATGACTACTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 51 .41 RPM |
| SRP017611_kidney | 79 .97 RPM |
| SRP017611_brain | 53 .04 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000001282 | ortholog_many2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000006776 | ortholog_one2many | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000010830 | ortholog_one2many | 3 retrogenes | |
| Equus caballus | ENSECAG00000013041 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000007362 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000657 | ortholog_one2many | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000005871 | ortholog_many2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000009338 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000019450 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_462 | 93.58 | 74.83 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1188 | 58.10 | 64.07 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ocun_1614 | 94.77 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000006650 retrocopies