Parental gene:

SAE1, ENSCAFG00000004180

Aliases:None
Description:SUMO1 activating enzyme subunit 1 [Source:HGNC Symbol;Acc:30660]
Organism:Dog (Canis familiaris)
Coordinates:1:108757963..108836499(-)


>ENSCAFG00000004180
ATGGTGGAGAAGGAGGAGGCTGGCGGCGGCATCAGCGAGGAGGAGGCGGCGCAGTATGACCGGCAGATCCGCCTGTGGGG
ATTGGAGGCCCAGAAACGGCTGCGGGCCTCCCGGGTGCTGCTTGTTGGCATGAAAGGACTTGGGGCTGAAATTGCCAAGA
ATCTCATTCTGGCGGGAGTGAAAGGACTGACCATGTTGGATCCTGAACAGGTATCTCCAGAAGACCCCGGAGCTCAGTTC
TTGGTCCGTACTGGATCTGTTGGCCGTAACAGGGCTGAAGCCTCTTTGGAGCGAGCCCAGAATCTCAACCCTATGGTGGA
TGTGAAGGTGGACATTGAGAATATAGAAAAGAAGCCAGAATCATTTTTCACTCAGTTTGATGCTGTTTGTCTGACTTGCT
GCTCCAGGGATGTCATAGTCAAAGTTGACCAGATCTGTCACAAAAATAGCATCAAGTTTTTTACAGGAGATGTTTTTGGC
TACCATGGATACACATTTGCCAATCTTGGAGAGCATGAATTCGTAGAGGAGAAAACCAAAGTTGCCAAAGTTAGCCAAGG
AGTAGAAGATGGACCTGATACCAAGAGAGCAAAACTTGATTCATCTGAAACAACTATGGTCAAAAAGAAGGTGGTCTTTT
GCTCCATTAAGGAAGCTCTGGAAGTGGACTGGAGCAGTGATAAGGCAAAGGCAGCTCTGAAGCGAACAACTTCGGATTAC
TTTCTCCTTCAAGTGCTCCTGAAGTTCCGTACAGATAAAGGAAGAGATCCTAGTTCTGATACCTTCGGGGAAGATTCTGA
GTTGTTGCTCCAGATTCGAAATGACGTGCTTGACTCCCTGGGTGTTAATCCTGACCTGCTTCCTGAAGATTTTGTCAGGT
ACTGCTTCTCTGAGATGGCCCCAGTGTGTGCAGTGGTTGGAGGGATCCTGGCCCAGGAAATTGTGAAGGCCCTGTCTCAA
AGGGACCCTCCTCACAACAACTTCTTCTTTTTTGATGGCATGAAGGGGAATGGGATTGTGGAATGCCTCGGCCCCAAGTG
A

Library Parental gene expression (RPM)
SRP017611_brain 64 .31 RPM
SRP017611_kidney 34 .01 RPM
SRP017611_liver 8 .85 RPM
SRP012049_cerebellum 51 .03 RPM



Species Parental gene accession Homology type Retrogenes number
Dipodomys ordii ENSDORG00000012199 ortholog_one2one 1 retrogene
retro_dord_638,
Homo sapiens ENSG00000142230 ortholog_one2one 1 retrogene
retro_hsap_829,
Gorilla gorilla ENSGGOG00000013078 ortholog_one2one 1 retrogene
retro_ggor_679,
Macaca mulatta ENSMMUG00000009506 ortholog_one2one 1 retrogene
retro_mmul_1087,
Nomascus leucogenys ENSNLEG00000002965 ortholog_one2many 1 retrogene
retro_nleu_261,
Nomascus leucogenys ENSNLEG00000002966 ortholog_one2many 1 retrogene
retro_nleu_262,
Pongo abelii ENSPPYG00000010168 ortholog_one2one 1 retrogene
retro_pabe_742,
Pan troglodytes ENSPTRG00000011202 ortholog_one2one 1 retrogene
retro_ptro_579,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_1705 77.78 74.28
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Download FASTA sequences of all ENSCAFG00000004180 retrocopies