Parental gene: | ENSCAFG00000008212 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 2:56341884..56345554(+) |
>ENSCAFG00000008212
GGAACTGCTCGCCGAAAGAAGAAGGTGGTTCATAGAACAGCTACAGCAGATGATAAAAAACTTCAGTTCTCCTTAAAGAA
GTTAGGGGTAAACAATATCTCTGGTATTGAAGAAGTGAATATGTTCACAAACCAAGGAACAGTGATCCATTTTAACAACC
CTAAAGTTCAGGCATCGCTGGCAGCGAACACTTTCACCATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGCTA
CCCAGTATCTTAAACCAGCTTGGTGCAGACAGTCTGACTAGTTTAAGAAGACTGGCTGAAGCTCTGCCCAAACAATCCGT
GGATGGAAAAGCACCACTTGCTACCGGAGAGGATGATGATGATGAAGTTCCAGATCTTGTGGAGAATTTTGATGAAGCTT
CCAAGAATGAAGCAAACTGA
GGAACTGCTCGCCGAAAGAAGAAGGTGGTTCATAGAACAGCTACAGCAGATGATAAAAAACTTCAGTTCTCCTTAAAGAA
GTTAGGGGTAAACAATATCTCTGGTATTGAAGAAGTGAATATGTTCACAAACCAAGGAACAGTGATCCATTTTAACAACC
CTAAAGTTCAGGCATCGCTGGCAGCGAACACTTTCACCATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGCTA
CCCAGTATCTTAAACCAGCTTGGTGCAGACAGTCTGACTAGTTTAAGAAGACTGGCTGAAGCTCTGCCCAAACAATCCGT
GGATGGAAAAGCACCACTTGCTACCGGAGAGGATGATGATGATGAAGTTCCAGATCTTGTGGAGAATTTTGATGAAGCTT
CCAAGAATGAAGCAAACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 20 .80 RPM |
| SRP017611_kidney | 221 .36 RPM |
| SRP017611_liver | 41 .12 RPM |
| SRP012049_cerebellum | 46 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000010012 | possible_ortholog | 5 retrogenes | |
| Canis familiaris | ENSCAFG00000003782 | within_species_paralog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000016600 | possible_ortholog | 4 retrogenes | |
| Ciona savignyi | ENSCSAVG00000009653 | ortholog_one2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000014031 | ortholog_one2one | 5 retrogenes | |
| Equus caballus | ENSECAG00000021629 | possible_ortholog | 1 retrogene | |
| Microcebus murinus | ENSMICG00000017182 | possible_ortholog | 3 retrogenes | |
| Monodelphis domestica | ENSMODG00000001762 | possible_ortholog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000004718 | possible_ortholog | 9 retrogenes | |
| Otolemur garnettii | ENSOGAG00000013918 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_531 | 91.96 | 78.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1660 | 77.32 | 69.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1741 | 69.64 | 79.86 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000008212 retrocopies