Parental gene:

ENSCAFG00000008212

Aliases:None
Description:None
Organism:Dog (Canis familiaris)
Coordinates:2:56341884..56345554(+)


>ENSCAFG00000008212
GGAACTGCTCGCCGAAAGAAGAAGGTGGTTCATAGAACAGCTACAGCAGATGATAAAAAACTTCAGTTCTCCTTAAAGAA
GTTAGGGGTAAACAATATCTCTGGTATTGAAGAAGTGAATATGTTCACAAACCAAGGAACAGTGATCCATTTTAACAACC
CTAAAGTTCAGGCATCGCTGGCAGCGAACACTTTCACCATTACAGGCCATGCTGAGACAAAGCAGCTGACAGAAATGCTA
CCCAGTATCTTAAACCAGCTTGGTGCAGACAGTCTGACTAGTTTAAGAAGACTGGCTGAAGCTCTGCCCAAACAATCCGT
GGATGGAAAAGCACCACTTGCTACCGGAGAGGATGATGATGATGAAGTTCCAGATCTTGTGGAGAATTTTGATGAAGCTT
CCAAGAATGAAGCAAACTGA

Library Parental gene expression (RPM)
SRP012049_cerebellum 46 .32 RPM
SRP017611_brain 20 .80 RPM
SRP017611_kidney 221 .36 RPM
SRP017611_liver 41 .12 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000010012 possible_ortholog 5 retrogenes
retro_btau_1161, retro_btau_1344, retro_btau_1361, retro_btau_459, retro_btau_551,
Canis familiaris ENSCAFG00000003782 within_species_paralog 2 retrogenes
retro_cfam_2135, retro_cfam_938,
Callithrix jacchus ENSCJAG00000016600 possible_ortholog 4 retrogenes
retro_cjac_1454, retro_cjac_1673, retro_cjac_2640, retro_cjac_281,
Ciona savignyi ENSCSAVG00000009653 ortholog_one2many 1 retrogene
retro_csav_25,
Dipodomys ordii ENSDORG00000014031 ortholog_one2one 5 retrogenes
retro_dord_287, retro_dord_341, retro_dord_422, retro_dord_54, retro_dord_66,
Equus caballus ENSECAG00000021629 possible_ortholog 1 retrogene
retro_ecab_200,
Microcebus murinus ENSMICG00000017182 possible_ortholog 3 retrogenes
retro_mmur_1219, retro_mmur_1301, retro_mmur_651,
Monodelphis domestica ENSMODG00000001762 possible_ortholog 3 retrogenes
retro_mdom_189, retro_mdom_454, retro_mdom_931,
Nomascus leucogenys ENSNLEG00000004718 possible_ortholog 9 retrogenes
retro_nleu_1081, retro_nleu_1199, retro_nleu_1284, retro_nleu_1446, retro_nleu_1797, retro_nleu_2526, retro_nleu_451, retro_nleu_496, retro_nleu_734,
Otolemur garnettii ENSOGAG00000013918 ortholog_one2one 1 retrogene
retro_ogar_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_531 91.96 78.42
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2. retro_cfam_1660 77.32 69.78
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3. retro_cfam_1741 69.64 79.86
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Download FASTA sequences of all ENSCAFG00000008212 retrocopies