Parental gene:

Btf3, ENSDORG00000014031

Aliases:None
Description:basic transcription factor 3 [Source:MGI Symbol;Acc:MGI:1202875]
Organism:Kangaroo rat (Dipodomys ordii)
Coordinates:GeneScaffold_3691:795..6813(+)


>ENSDORG00000014031
ATGCGACGGACGGGCGCCCCGGCTCAGGCCGACTCTCGGGGGCGAGGTCGAGCCAGGGGCGGCGGCCCTGGGGGCGAGGC
GACGCCGTCTCTTCCTCCACCCCGCGGCGGAACCCGAGGACAGGAGCCTCAGNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNCAAACTGCAGGCACAAGTGCGCGGGAAAGGAACTGCTCGTAGAAAGAAGAAGGTGGTTCATAGAACAGCTACA
GCAGATGACAAAAAACTTCAGTTCTCCTTAAAGAAGTTAGGAGTGAACAATATCTCTGGTATTGAGGAGGTGAATATGTT
TACAAACCAAGGAACAGTGATCCACTTTAACAACCCTAAAGTTCAGGCATCTTTGGCAGCAAATACTTTCACCATTACAG
GCCATGCTGAGACAAAGCAGCTGACAGAAATGCTTCCCAGCATCTTGAACCAGCTTGGTGCAGACAGTCTGACTAGTTTA
AGGAGACTGGCTGAAGCTCTGCCCAAACAATCTGTGGATGGAAAAGCACCACTTGCTACTGGCGAGGATGATGATGATGA
AGTTCCA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008212 ortholog_one2one 3 retrogenes
retro_cfam_1660, retro_cfam_1741, retro_cfam_531,
Callithrix jacchus ENSCJAG00000016600 possible_ortholog 4 retrogenes
retro_cjac_1454, retro_cjac_1673, retro_cjac_2640, retro_cjac_281,
Ciona savignyi ENSCSAVG00000009653 ortholog_one2one 1 retrogene
retro_csav_25,
Monodelphis domestica ENSMODG00000001762 possible_ortholog 3 retrogenes
retro_mdom_189, retro_mdom_454, retro_mdom_931,
Otolemur garnettii ENSOGAG00000013918 ortholog_one2one 1 retrogene
retro_ogar_46,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dord_54 95.45 58.20
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2. retro_dord_66 56.52 70.37
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3. retro_dord_287 93.33 70.37
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4. retro_dord_341 94.06 53.44
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5. retro_dord_422 66.96 57.67
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Download FASTA sequences of all ENSDORG00000014031 retrocopies