Parental gene: | ENSCAFG00000008221 |
| Aliases: | None |
| Description: | Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:F1PBT3] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 6:18071019..18084389(+) |
>ENSCAFG00000008221
GTCCAGGCCTCCTCTAGCCCGTGGAATCCAACCCCGGCTTCCGTCAGCAGTCCTTCCTTGCTGCTCCCCATCCCTGCCAT
CGTGTTCATCGCTGTGGGCATCTATTTGTTGCTGCTCGGCGTAGTGCTGCTGATTAGGCACTGCCTGCTGGCCCAGGGCT
GCTGCACAGACTGCAGCTCCCCCTGCAGGAAGCAAGGCGCCTCCAGGCCCCAGGACTGTTGCTGGACCTGTGCAGAAGCC
TGCGATTTCCCTCTGCCTAGCCCAGCCCACTGCCTGGATGCCTGCTGCCCCCAGCCCACCGAAGCTGAGGTGGCAGCCGG
GTCAGGGGGCAGGGAGCACAGAGAGCTGTGGCAAGAACTCCTGCACTCAGCTGTTTGGAACACTGCTTCCTTGCTGAGTT
CTCAACAGCACAGGGCTGGGGCCCTCGCTGCCCTCGCTGCTGCCCACTCTGTGACTGTGCTTGTGCGTGCCAACTTCCTG
ACTGCCAGAGCCTCAACTGTCTCTGCTTCGAGATCAAGCTCCGATGAAGATCCAGACTTCTTGCCCCTTGGAGAGTGGCC
AGCCCCCGGGGCCACCAAGCCCCCATCCCTGATGAGCCTCTCTCCAGGCCACTGGAACCACAGATGGCCTGCTCAGCTCC
TCCCCCTGGGAACCAGCAGTGGAGAGCCTGGCTCCCTGCAGAGCAGGACTCAGGGAGCCCTTGGCCAGTTGGACCGAAGC
CCCTTTGGAGGGCCAGGAGAGAGAGGGGCTAGTGCTCTGACACGAGCCTCTGCCTGCCTCTCCCCTCCCCACATAAAGCC
CCATGCTGGCATGAATGTCAGGGGCTTCAGTTCTGCTTCTAGGCAAGGTGACCCCATGGCAGAGCGCAAGCCAGAAGGGT
CCATCTTCTACATGACCTGTCTGTCCATGGCTCTGGCCTATTGCGTTTCCCCAGATGACAGTACGCTACCCCACCCTCAG
CTGGGAAACACCCAGCAACAAACAGAGTTAGGAAAGGAACTGACCGGCAACATGCCCTACCAATACCCAGCGCTGACCCC
GGAGCAGAAGAAGGAGCTTTCTGACATCGCTCACCGCATTGTGGCTCCGGGCAAGGGCATCCTGGCTGCAGATGAGTCCA
CTGGGAGCATCGCCAAGCGGCTGCAGTCCATTGGCACTGAGAACACGGAGGAGAACCGGCGCTTCTACCGCCAGCTGTTG
CTGACCGCCGACGACCGTGTAAACCCCTGCATTGGGGGTGTCATCCTATTCCACGAGACACTGTACCAGAAGACCGATGA
TGGGCGTCCCTTCCCCCAAGTTATCAAATCCAAGGGTGGTGTTGTAGGCATCAAGGTGGACAAAGGTGTGGTACCCCTGG
CAGGAACAAATGGCGAGACTACCACTCAAGGGCTGGATGGGCTGTCTGAGCGCTGTGCCCAGTACAAGAAGGATGGGGCT
GACTTTGCCAAGTGGCGCTGTGTGCTGAAAATTGGGGAACACACTCCCTCAGCCCTTGCGATCATGGAAAATGCCAACGT
TCTGGCCCGTTATGCCAGCATCTGCCAGCAGAATGGCATCGTGCCCATTGTGGAGCCTGAGATCCTCCCCGATGGGGACC
ATGACTTGAAGCGCTGTCAGTATGTAACTGAGAAGGTGCTGGCTGCTGTCTACAAGGCTCTGAGTGACCACCACATCTAC
CTGGAAGGCACTTTGCTGAAGCCCAATATGGTAACCCCAGGCCATGCCTGCACCCATAAATATTCTCATGAGGAGATTGC
CATGGCAACTGTCACAGCACTGCGCCGCACAGTACCCCCCGCTGTTACTGGGATCACCTTCCTATCAGGCGGCCAGAGTG
AGGAGGAGGCATCCATCAACCTCAATGCCATCAACAAGTGCCCCCTGCTGAAGCCATGGGCCCTGACCTTCTCCTATGGC
CGAGCCCTACAGGCTTCTGCCCTGAAGGCCTGGGGTGGAAAGAAGGAGAACCTGAAGGCTGCCCAGGAAGAGTATATCAA
GCGAGCCCTGGCCAACAGCCTCGCCTGTCAAGGAAAGTACACCCCAAGTGGTCAGGCCGGGGCTGCAGCCAGCGAGTCCC
TCTTCATCTCTAACCACGCCTACTAA
GTCCAGGCCTCCTCTAGCCCGTGGAATCCAACCCCGGCTTCCGTCAGCAGTCCTTCCTTGCTGCTCCCCATCCCTGCCAT
CGTGTTCATCGCTGTGGGCATCTATTTGTTGCTGCTCGGCGTAGTGCTGCTGATTAGGCACTGCCTGCTGGCCCAGGGCT
GCTGCACAGACTGCAGCTCCCCCTGCAGGAAGCAAGGCGCCTCCAGGCCCCAGGACTGTTGCTGGACCTGTGCAGAAGCC
TGCGATTTCCCTCTGCCTAGCCCAGCCCACTGCCTGGATGCCTGCTGCCCCCAGCCCACCGAAGCTGAGGTGGCAGCCGG
GTCAGGGGGCAGGGAGCACAGAGAGCTGTGGCAAGAACTCCTGCACTCAGCTGTTTGGAACACTGCTTCCTTGCTGAGTT
CTCAACAGCACAGGGCTGGGGCCCTCGCTGCCCTCGCTGCTGCCCACTCTGTGACTGTGCTTGTGCGTGCCAACTTCCTG
ACTGCCAGAGCCTCAACTGTCTCTGCTTCGAGATCAAGCTCCGATGAAGATCCAGACTTCTTGCCCCTTGGAGAGTGGCC
AGCCCCCGGGGCCACCAAGCCCCCATCCCTGATGAGCCTCTCTCCAGGCCACTGGAACCACAGATGGCCTGCTCAGCTCC
TCCCCCTGGGAACCAGCAGTGGAGAGCCTGGCTCCCTGCAGAGCAGGACTCAGGGAGCCCTTGGCCAGTTGGACCGAAGC
CCCTTTGGAGGGCCAGGAGAGAGAGGGGCTAGTGCTCTGACACGAGCCTCTGCCTGCCTCTCCCCTCCCCACATAAAGCC
CCATGCTGGCATGAATGTCAGGGGCTTCAGTTCTGCTTCTAGGCAAGGTGACCCCATGGCAGAGCGCAAGCCAGAAGGGT
CCATCTTCTACATGACCTGTCTGTCCATGGCTCTGGCCTATTGCGTTTCCCCAGATGACAGTACGCTACCCCACCCTCAG
CTGGGAAACACCCAGCAACAAACAGAGTTAGGAAAGGAACTGACCGGCAACATGCCCTACCAATACCCAGCGCTGACCCC
GGAGCAGAAGAAGGAGCTTTCTGACATCGCTCACCGCATTGTGGCTCCGGGCAAGGGCATCCTGGCTGCAGATGAGTCCA
CTGGGAGCATCGCCAAGCGGCTGCAGTCCATTGGCACTGAGAACACGGAGGAGAACCGGCGCTTCTACCGCCAGCTGTTG
CTGACCGCCGACGACCGTGTAAACCCCTGCATTGGGGGTGTCATCCTATTCCACGAGACACTGTACCAGAAGACCGATGA
TGGGCGTCCCTTCCCCCAAGTTATCAAATCCAAGGGTGGTGTTGTAGGCATCAAGGTGGACAAAGGTGTGGTACCCCTGG
CAGGAACAAATGGCGAGACTACCACTCAAGGGCTGGATGGGCTGTCTGAGCGCTGTGCCCAGTACAAGAAGGATGGGGCT
GACTTTGCCAAGTGGCGCTGTGTGCTGAAAATTGGGGAACACACTCCCTCAGCCCTTGCGATCATGGAAAATGCCAACGT
TCTGGCCCGTTATGCCAGCATCTGCCAGCAGAATGGCATCGTGCCCATTGTGGAGCCTGAGATCCTCCCCGATGGGGACC
ATGACTTGAAGCGCTGTCAGTATGTAACTGAGAAGGTGCTGGCTGCTGTCTACAAGGCTCTGAGTGACCACCACATCTAC
CTGGAAGGCACTTTGCTGAAGCCCAATATGGTAACCCCAGGCCATGCCTGCACCCATAAATATTCTCATGAGGAGATTGC
CATGGCAACTGTCACAGCACTGCGCCGCACAGTACCCCCCGCTGTTACTGGGATCACCTTCCTATCAGGCGGCCAGAGTG
AGGAGGAGGCATCCATCAACCTCAATGCCATCAACAAGTGCCCCCTGCTGAAGCCATGGGCCCTGACCTTCTCCTATGGC
CGAGCCCTACAGGCTTCTGCCCTGAAGGCCTGGGGTGGAAAGAAGGAGAACCTGAAGGCTGCCCAGGAAGAGTATATCAA
GCGAGCCCTGGCCAACAGCCTCGCCTGTCAAGGAAAGTACACCCCAAGTGGTCAGGCCGGGGCTGCAGCCAGCGAGTCCC
TCTTCATCTCTAACCACGCCTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 782 .73 RPM |
| SRP017611_kidney | 639 .97 RPM |
| SRP017611_liver | 74 .04 RPM |
| SRP012049_cerebellum | 445 .94 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000006874 | ortholog_many2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007434 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019230 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000149925 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013979 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011210 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000983 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000015696 | ortholog_many2many | 4 retrogenes | |
| Mus musculus | ENSMUSG00000030695 | ortholog_many2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002152 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006329 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009760 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007244 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007983 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023647 | ortholog_many2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_190 | 96.70 | 51.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_631 | 80.11 | 52.78 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000008221 retrocopies