Parental gene:

ALDOA, ENSCPOG00000007434

Aliases:None
Description:Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:H0VA39]
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_4:44977425..44980103(-)


>ENSCPOG00000007434
ATGCCCCACCAATATCCTGCACTGACTCCGGAGCAGAAAAAAGAGCTATCTGACATTGCCCACCGCATTGTGGCTCCGGG
CAAGGGCATCCTGGCTGCAGATGAGTCCACTGGAAGCATTGCCAAGCGGCTGCAGTCTATTGGCACTGAGAACACCGAAG
AGAACCGGCGTTTCTACCGCCAGCTGCTGTTGACTGCTGATGACCGTGTGAATCCCTGCATTGGGGGTGTCATCCTCTTC
CATGAGACGCTCTACCAGAAGGCTGATGATGGACGTCCTTTCCCCCAAGTCATCAAATCCAAGGGTGGTGTCGTGGGCAT
CAAGGTAGACAAGGGCGTGGTGCCCCTGGCGGGAACAAATGGCGAGACCACCACCCAAGGACTGGATGGATTGTCTGAGC
GCTGTGCCCAGTACAAGAAGGATGGAGCTGACTTTGCCAAGTGGCGCTGTGTGCTGAAGATTGGAGAACACACCCCCTCA
GCCCTTGCCATCATGGAAAATGCCAACGTTCTGGCCCGTTATGCCAGCATCTGCCAGCAGAATGGCATTGTGCCCATTGT
GGAGCCTGAGATTCTCCCTGATGGGGACCATGACTTGAAGCGCTGTCAGTACGTGACTGAGAAGGTGCTTGCTGCTGTCT
ACAAGGCTCTAAGTGATCACCACGTCTACCTGGAAGGCACCTTGCTGAAGCCCAACATGGTCACTGCAGGTCATGCCTGT
ACCCATAAGTATTCCCATGAGGAGATTGCCATGGCGACTGTCACAGCACTGCGCCGCACAGTGCCCCCCGCTGTCACTGG
GATTACCTTCCTGTCTGGAGGACAGAGTGAGGAGGAGGCATCCATCAACCTCAATGCCATCAACAAGTGTCCCCTCCTGA
AGCCATGGGCCCTGACCTTCTCCTACGGTCGGGCCTTGCAGGCTTCGGCACTAAAGGCATGGGGTGGGAAGAAGGAGAAC
CTCAAGGCTGCTCAGGAGGAATATATCAAGCGAGCCCTGGCCAACAGCCTCGCCTGTCAAGGAAAGTACACTCCAAGTGG
TCAGGCTGGGGCTGCAGCCAGTGAGTCCCTCTTCATCTCTAACCATGCCTACTAA

Library Parental gene expression (RPM)
SRP017611_liver 47 .31 RPM
SRP017611_kidney 578 .29 RPM
SRP017611_brain 677 .14 RPM
SRP040447_lung 618 .87 RPM
SRP040447_skeletal_muscle 11296 .20 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000008221 ortholog_one2many 2 retrogenes
retro_cfam_190, retro_cfam_631,
Callithrix jacchus ENSCJAG00000006874 ortholog_one2many 1 retrogene
retro_cjac_1803,
Echinops telfairi ENSETEG00000019230 ortholog_one2many 1 retrogene
retro_etel_20,
Homo sapiens ENSG00000149925 ortholog_one2one 1 retrogene
retro_hsap_740,
Gorilla gorilla ENSGGOG00000013979 ortholog_one2one 1 retrogene
retro_ggor_621,
Myotis lucifugus ENSMLUG00000011210 ortholog_one2one 3 retrogenes
retro_mluc_1172, retro_mluc_2634, retro_mluc_808,
Macaca mulatta ENSMMUG00000000983 ortholog_one2many 1 retrogene
retro_mmul_2596,
Monodelphis domestica ENSMODG00000015696 ortholog_one2many 4 retrogenes
retro_mdom_1236, retro_mdom_1356, retro_mdom_528, retro_mdom_96,
Mus musculus ENSMUSG00000030695 ortholog_one2many 3 retrogenes
retro_mmus_2160, retro_mmus_42, retro_mmus_90,
Nomascus leucogenys ENSNLEG00000002152 ortholog_one2one 1 retrogene
retro_nleu_133,
Oryctolagus cuniculus ENSOCUG00000006329 ortholog_one2many 1 retrogene
retro_ocun_1550,
Ochotona princeps ENSOPRG00000009760 ortholog_one2one 1 retrogene
retro_opri_914,
Pongo abelii ENSPPYG00000007244 ortholog_one2one 1 retrogene
retro_pabe_636,
Pan troglodytes ENSPTRG00000007983 ortholog_one2one 1 retrogene
retro_ptro_526,
Rattus norvegicus ENSRNOG00000023647 ortholog_one2many 7 retrogenes
retro_rnor_1343, retro_rnor_1541, retro_rnor_1796, retro_rnor_1807, retro_rnor_226, retro_rnor_2791, retro_rnor_536,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_951 59.74 81.32
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Download FASTA sequences of all ENSCPOG00000007434 retrocopies