Parental gene: | ENSMODG00000015696 |
| Aliases: | None |
| Description: | Fructose-bisphosphate aldolase [Source:UniProtKB/TrEMBL;Acc:F7E0Q7] |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 6:158739667..158742533(+) |
>ENSMODG00000015696
ATGCCTTGCCAATTCCCAGCATTGTCACCAGAGCAAAAGAAAGAGCTCTCTGAAATAGCTCGAAGAATTGTTGCTCCAGG
CAAGGGAATCCTGGCCGCAGATGAGTCCACAGGCAGCATTGCAAAGCGGCTGCAGTCCATTGGAACTGAGAACACAGAAG
AAAATCGCCGCCTTTATAGGCAGTTACTTCTGACAGCAGATGATCGAGTGAACAGCTGCATTGGAGGTGTCATCCTTTTC
CATGAGACGCTCTACCAGAAAGCTGATGATGGTCGTCCCTTTCCCAAAGTCATAAAGGCCAAGGGTGGTGTTGTGGGCAT
CAAGGTGGACAAAGGTGTAGTGCCCCTGGCAGGGACCAATGGGGAGACTACTACCCAAGGTCTGGATGGGCTAGCTGAGC
GCTGTGCCCAGTATAAGAAGGATGGGGCTGACTTTGCCAAGTGGCGTTGTGTTCTGAAGATTGGGGAAAATACACCTTCT
CCACTTGCCATCATGGAGAATGCCAACGTGCTGGCCCGATATGCCAGCATTTGCCAGCAGAATGGCATTGTCCCCATTGT
GGAGCCAGAGATCCTCCCTGATGGAGAACATGATCTGAAGTGTTGCCAGTATGTCACTGAGAAGGTTCTGGCTGCTGTCT
ACAAAGCTTTGAGTGACCACCATATCTATCTGGAGGGGACCTTGCTGAAGCCTAACATGGTCACTCCTGGCCATGCTTGT
ACCCAGAAATATTCGCATGAGGAGATTGCAATGGCAACTGTAACCGCCCTTCGCCGGACTGTGCCTCCTGCAGTCACTGG
TATCACCTTCCTGTCTGGGGGTCAGAGTGAGGAGGATGCTTCCATCAATCTCAATGCCATCAACACCTGTCCCTTGCACA
AGCCATGGGCCCTGACCTTTTCTTATGGCCGAGCCCTGCAGGCATCTGCCCTCAAGACCTGGGGTGGAAAGAAGGAAAAT
GTCCAGGCTGCCCAGGAAGAATATGTTAAACGGGCCTTGGCTAACAGCCAGGCTGCTCAAGGCAAGTATACTCCATCTGG
AAAGTCAGGAGCTGCAGCCAGCGAGTCCCTCTTTGTCTCTAACCATGCCTACTAA
ATGCCTTGCCAATTCCCAGCATTGTCACCAGAGCAAAAGAAAGAGCTCTCTGAAATAGCTCGAAGAATTGTTGCTCCAGG
CAAGGGAATCCTGGCCGCAGATGAGTCCACAGGCAGCATTGCAAAGCGGCTGCAGTCCATTGGAACTGAGAACACAGAAG
AAAATCGCCGCCTTTATAGGCAGTTACTTCTGACAGCAGATGATCGAGTGAACAGCTGCATTGGAGGTGTCATCCTTTTC
CATGAGACGCTCTACCAGAAAGCTGATGATGGTCGTCCCTTTCCCAAAGTCATAAAGGCCAAGGGTGGTGTTGTGGGCAT
CAAGGTGGACAAAGGTGTAGTGCCCCTGGCAGGGACCAATGGGGAGACTACTACCCAAGGTCTGGATGGGCTAGCTGAGC
GCTGTGCCCAGTATAAGAAGGATGGGGCTGACTTTGCCAAGTGGCGTTGTGTTCTGAAGATTGGGGAAAATACACCTTCT
CCACTTGCCATCATGGAGAATGCCAACGTGCTGGCCCGATATGCCAGCATTTGCCAGCAGAATGGCATTGTCCCCATTGT
GGAGCCAGAGATCCTCCCTGATGGAGAACATGATCTGAAGTGTTGCCAGTATGTCACTGAGAAGGTTCTGGCTGCTGTCT
ACAAAGCTTTGAGTGACCACCATATCTATCTGGAGGGGACCTTGCTGAAGCCTAACATGGTCACTCCTGGCCATGCTTGT
ACCCAGAAATATTCGCATGAGGAGATTGCAATGGCAACTGTAACCGCCCTTCGCCGGACTGTGCCTCCTGCAGTCACTGG
TATCACCTTCCTGTCTGGGGGTCAGAGTGAGGAGGATGCTTCCATCAATCTCAATGCCATCAACACCTGTCCCTTGCACA
AGCCATGGGCCCTGACCTTTTCTTATGGCCGAGCCCTGCAGGCATCTGCCCTCAAGACCTGGGGTGGAAAGAAGGAAAAT
GTCCAGGCTGCCCAGGAAGAATATGTTAAACGGGCCTTGGCTAACAGCCAGGCTGCTCAAGGCAAGTATACTCCATCTGG
AAAGTCAGGAGCTGCAGCCAGCGAGTCCCTCTTTGTCTCTAACCATGCCTACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000008221 | ortholog_many2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000006874 | ortholog_many2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007434 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000019230 | ortholog_many2many | 1 retrogene | |
| Homo sapiens | ENSG00000149925 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000013979 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000011210 | ortholog_one2many | 3 retrogenes | |
| Macaca mulatta | ENSMMUG00000000983 | ortholog_many2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000014418 | within_species_paralog | 2 retrogenes | |
| Mus musculus | ENSMUSG00000030695 | ortholog_many2many | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002152 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000006329 | ortholog_many2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000009760 | ortholog_one2many | 1 retrogene | |
| Pongo abelii | ENSPPYG00000007244 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000007983 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000023647 | ortholog_many2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_96 | 66.11 | 97.53 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_528 | 91.76 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1236 | 84.43 | 78.57 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1356 | 91.69 | 89.01 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000015696 retrocopies