Parental gene: | TRAPPC4, ENSCAFG00000012383 |
| Aliases: | None |
| Description: | trafficking protein particle complex 4 [Source:HGNC Symbol;Acc:19943] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 5:14830872..14833444(-) |
>ENSCAFG00000012383
ATGGCGATCTTTAGTGTGTATGTGGTGAAACAAGCGGGCGGCCTGATCTACCAGCTGGACAGCTACGCGCCACGGGCCGA
GGCTGAGAAGACTTTCAGTTACCCTCTTGATCTGCTGCTCAAGCTGCACGACGAGCGTGTGCTAGTTGCCTTCGGCCAGC
GCGACGGCATCCGGGTGGGCCACGCAGTGCTGGCCATCAATGGCGTGGACGTGAACGGCAAGTACACTGCCGATGGGAAA
GAGGTGCTGGAGTACCTGGGCAATCCTGCCAACTACCCGGTGTCTATTCGATTCGGCCGACCCCGCCTCACCTCCAATGA
GAAGCTTATGCTGGCCTCTATGTTCCACTCGCTGTTCGCAATTGGTTCCCAGCTGTCTCCAGAACAGGGCAGCTCAGGCA
TTGAGATGCTGGAGACCGACACGTTCAAACTGCACTGCTTCCAGACACTGACAGGGATCAAGTTTGTGGTGCTGGCAGAT
CCTAGGCAAGCGGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATCTACTCAGACTTTGCCCTTAAGAATCCATTCTA
CTCCCTGGAAATGCCCATCAGGTGTGAGCTGTTTGACCAGAACCTAAAGTTAGCCCTGGAGGTGGCAGAGAAGGCTGGAA
CTTTTGGACCTGGATCATAG
ATGGCGATCTTTAGTGTGTATGTGGTGAAACAAGCGGGCGGCCTGATCTACCAGCTGGACAGCTACGCGCCACGGGCCGA
GGCTGAGAAGACTTTCAGTTACCCTCTTGATCTGCTGCTCAAGCTGCACGACGAGCGTGTGCTAGTTGCCTTCGGCCAGC
GCGACGGCATCCGGGTGGGCCACGCAGTGCTGGCCATCAATGGCGTGGACGTGAACGGCAAGTACACTGCCGATGGGAAA
GAGGTGCTGGAGTACCTGGGCAATCCTGCCAACTACCCGGTGTCTATTCGATTCGGCCGACCCCGCCTCACCTCCAATGA
GAAGCTTATGCTGGCCTCTATGTTCCACTCGCTGTTCGCAATTGGTTCCCAGCTGTCTCCAGAACAGGGCAGCTCAGGCA
TTGAGATGCTGGAGACCGACACGTTCAAACTGCACTGCTTCCAGACACTGACAGGGATCAAGTTTGTGGTGCTGGCAGAT
CCTAGGCAAGCGGGAATAGATTCTCTTCTCCGAAAGATTTATGAGATCTACTCAGACTTTGCCCTTAAGAATCCATTCTA
CTCCCTGGAAATGCCCATCAGGTGTGAGCTGTTTGACCAGAACCTAAAGTTAGCCCTGGAGGTGGCAGAGAAGGCTGGAA
CTTTTGGACCTGGATCATAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 12 .78 RPM |
| SRP017611_kidney | 29 .52 RPM |
| SRP017611_liver | 13 .12 RPM |
| SRP012049_cerebellum | 19 .28 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000013703 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000007885 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000004759 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000014340 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_760 | 92.99 | 71.69 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012383 retrocopies