Parental gene: | ENSCAFG00000017228 |
| Aliases: | None |
| Description: | None |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | X:59067877..59072713(+) |
>ENSCAFG00000017228
ATGGAGACGACTAGGGGAACTGCTGAGCCGGTTCCCGGGGAACTGGTGTCTGTGGCACATGCTCTTTCTCTCCCAGCCGA
GTCTTATGGCAATGATCCTGATATCGAGATGGCTTGGGCCATGAAAGCAATGCAGCATGCTGAAGTCTACTACAAGCTGA
TTTCATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTGGATGACCAAATCTATTCTGAGTTTCGGAAAAATTTCGAG
AAACTCAGGATAGATGTGTTGGATCCAGAAGAGCTCAAATCAGAGTCCGCTAAAGAGAAGTGGAGACCATTCTGCTTGAA
GTTTGACGGGGTTGTAGAAGACTTCAACTATGGTACTTTGCTGCGACTGGATTGTTCTCAGGGCTACACTGAGGAAAACA
CCATCTTTGCCCCCAGGATACAATTTCTTGCTATTGAAATTGCTCGGAACCGGGAAGGCTATAACAAAGCAGTTTACACC
AGTGTTTATGACAAAGAAGAAGAGAAAGAAGGCAACCATGGAAGAGGGAAGGGAGCTGACAGTGCACAGGCAGAAGAGAA
AGGAGCCAACAGAGAAAGAGAAAACGCAAAAACCAACAAAGGAGAAGAAAAAGAGAAAGAAGCCAACAAAGAAATCCACA
AGAGTAGTGAAATAGCTATGTAA
ATGGAGACGACTAGGGGAACTGCTGAGCCGGTTCCCGGGGAACTGGTGTCTGTGGCACATGCTCTTTCTCTCCCAGCCGA
GTCTTATGGCAATGATCCTGATATCGAGATGGCTTGGGCCATGAAAGCAATGCAGCATGCTGAAGTCTACTACAAGCTGA
TTTCATCAGTTGACCCACAGTTCCTGAAACTCACCAAAGTGGATGACCAAATCTATTCTGAGTTTCGGAAAAATTTCGAG
AAACTCAGGATAGATGTGTTGGATCCAGAAGAGCTCAAATCAGAGTCCGCTAAAGAGAAGTGGAGACCATTCTGCTTGAA
GTTTGACGGGGTTGTAGAAGACTTCAACTATGGTACTTTGCTGCGACTGGATTGTTCTCAGGGCTACACTGAGGAAAACA
CCATCTTTGCCCCCAGGATACAATTTCTTGCTATTGAAATTGCTCGGAACCGGGAAGGCTATAACAAAGCAGTTTACACC
AGTGTTTATGACAAAGAAGAAGAGAAAGAAGGCAACCATGGAAGAGGGAAGGGAGCTGACAGTGCACAGGCAGAAGAGAA
AGGAGCCAACAGAGAAAGAGAAAACGCAAAAACCAACAAAGGAGAAGAAAAAGAGAAAGAAGCCAACAAAGAAATCCACA
AGAGTAGTGAAATAGCTATGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 23 .26 RPM |
| SRP017611_kidney | 107 .24 RPM |
| SRP017611_liver | 10 .15 RPM |
| SRP012049_cerebellum | 32 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000018571 | ortholog_many2many | 1 retrogene | |
| Equus caballus | ENSECAG00000009882 | ortholog_one2many | 1 retrogene | |
| Erinaceus europaeus | ENSEEUG00000001116 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009685 | ortholog_one2many | 2 retrogenes | |
| Mus musculus | ENSMUSG00000031226 | ortholog_one2many | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000001088 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000015205 | ortholog_many2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002662 | ortholog_one2many | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017872 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000003411 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_944 | 77.39 | 51.82 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1588 | 92.43 | 83.64 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000017228 retrocopies