Parental gene:

Pbdc1, ENSMUSG00000031226

Aliases:Pbdc1, 2610029G23Rik
Description:polysaccharide biosynthesis domain containing 1 [Source:MGI Symbol;Acc:MGI:1914933]
Organism:Mouse (Mus musculus)
Coordinates:X:105079755..105117090(+)


>ENSMUSG00000031226
ATGGATGCTGCCGGCGAAAGCGAAGAGCCGGTCTCTGGGGAAGCGTTGTCCATCGCCCATGCGCTCTCTCACCCTCCGGA
GTCATATGGCAACGACCCTGATATTGAAATGGCTTGGGCCATTCGAGCAATGCAGCATGCTGAAGTCTATTATAAACTGA
TTTCATCAGTTGACCCACAGTTTCTGAAACTCACCAAAGTAGATGACCAAATCTACTCTGAGTTCCGTGAGATTTTTGAG
ACACTCAGGGTAGATGTATTGGACCCAGAAGAACTCAAATCAGAATCAGCTAAAGAAAAGTGGAGACCATTCTGCTTAAA
ATTTGAAGGGATCGTAGAAGATTATAACTACGGGACTTTACTGCGACTGGATTGTTCCCAGGGCTACACTGAAGAGAACA
CCATCTTTGCACCCAGGATTCAATTTTTTGCCATTGAAATTGCTCGGAACCGGGAAGGCTATAATAAAGCAGTTTCCGTC
AGTATTCAGGACAAAGAAGGAGAGGAAGGAGCTGGCAATAAAGAAGAAGCAGCTGAGAAAGGAGCTGATAGTGGAGGAGA
AAAAGAGGAAGGAGCCAACAGAGAAGGAGAAAAGTAG

Library Parental gene expression (RPM)
SRP007412_brain 12 .20 RPM
SRP007412_cerebellum 9 .77 RPM
SRP007412_heart 8 .72 RPM
SRP007412_kidney 13 .59 RPM
SRP007412_liver 8 .27 RPM
SRP007412_testis 8 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000017228 ortholog_one2many 2 retrogenes
retro_cfam_1588, retro_cfam_944,
Callithrix jacchus ENSCJAG00000018571 ortholog_one2many 1 retrogene
retro_cjac_1880,
Equus caballus ENSECAG00000009882 ortholog_one2one 1 retrogene
retro_ecab_532,
Erinaceus europaeus ENSEEUG00000001116 ortholog_one2one 1 retrogene
retro_eeur_377,
Monodelphis domestica ENSMODG00000009685 ortholog_one2one 2 retrogenes
retro_mdom_1002, retro_mdom_572,
Oryctolagus cuniculus ENSOCUG00000001088 ortholog_one2one 3 retrogenes
retro_ocun_1017, retro_ocun_1402, retro_ocun_595,
Otolemur garnettii ENSOGAG00000015205 ortholog_one2many 1 retrogene
retro_ogar_3063,
Rattus norvegicus ENSRNOG00000002662 ortholog_one2one 3 retrogenes
retro_rnor_1703, retro_rnor_1705, retro_rnor_826,
Sarcophilus harrisii ENSSHAG00000017872 ortholog_one2one 1 retrogene
retro_shar_132,
Tupaia belangeri ENSTBEG00000003411 ortholog_one2one 3 retrogenes
retro_tbel_3448, retro_tbel_494, retro_tbel_979,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1569 92.00 100.00
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Download FASTA sequences of all ENSMUSG00000031226 retrocopies