Parental gene:

ZCCHC10, ENSCAFG00000031203

Aliases:None
Description:zinc finger, CCHC domain containing 10 [Source:HGNC Symbol;Acc:25954]
Organism:Dog (Canis familiaris)
Coordinates:11:21271496..21290981(-)


>ENSCAFG00000031203
ATGGCGACTCCCATGCATCGGCTCATAGCTCGGAGACAAGCTGAAGCAAATAAACAACATGTAAGATGTCAGAAATGCTT
GGAATTTGGACATTGGACTTATGAATGCACCGGAAAAAGAAAATACTTGCATAGGCCTTCAAGAACAGCAGAACTAAAGA
AAGCTTTAAAAGAAAAAGAAAACAGATTATTATTATTGCAACAAAGCATCGGAGAAACTAATGTAGAAAGGAAGACCAAG
AAAAAAAGGTCTAAGAGTGTAACCAGTTCCAGCAGCAGTAGCAGCGACAGTTCAGCCAGTGATTCTTCATCAGAGAGTGA
AGAAACGTCTACCTCATCCTCCTCAGAGGACAGCGACACTGATGAAAGCTCCTCCAGTTCCTCATCTTCATCCTCCTCCA
CAAGCTCTTCCTCGTCCTCTGATTCAGACTCAGATTCCAGCTCTTCCAGTAGCAGCAGCACCAGCACAGAGAGCAGCTCT
GAGGATGAACCACCAAAGAAGAAGAAAAAGAAATAG

Library Parental gene expression (RPM)
SRP012049_cerebellum 4 .87 RPM
SRP017611_brain 3 .73 RPM
SRP017611_kidney 10 .70 RPM
SRP017611_liver 1 .89 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001420 ortholog_one2one 9 retrogenes
retro_chof_1243, retro_chof_1263, retro_chof_1773, retro_chof_2048, retro_chof_2132, retro_chof_2183, retro_chof_501, retro_chof_790, retro_chof_923,
Dasypus novemcinctus ENSDNOG00000017302 ortholog_one2one 1 retrogene
retro_dnov_257,
Myotis lucifugus ENSMLUG00000011366 ortholog_one2one 4 retrogenes
retro_mluc_172, retro_mluc_2240, retro_mluc_2241, retro_mluc_2574,
Monodelphis domestica ENSMODG00000013827 ortholog_one2one 1 retrogene
retro_mdom_1405,
Mus musculus ENSMUSG00000018239 ortholog_one2many 1 retrogene
retro_mmus_269,
Otolemur garnettii ENSOGAG00000032171 ortholog_one2one 1 retrogene
retro_ogar_3011,
Rattus norvegicus ENSRNOG00000006943 ortholog_one2one 3 retrogenes
retro_rnor_2037, retro_rnor_2528, retro_rnor_801,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cfam_643 71.51 100.00
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Download FASTA sequences of all ENSCAFG00000031203 retrocopies