Parental gene:

ZCCHC10, ENSDNOG00000017302

Aliases:None
Description:zinc finger, CCHC domain containing 10 [Source:HGNC Symbol;Acc:25954]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:scaffold_13463:34883..72451(-)


>ENSDNOG00000017302
ATGGCGACTCCCATGCACCGGCTCATAGCCCGGAGACAGGCATTTACAGAGTTCCAGCCTGTCAAGACTTTTATCCTAGT
TCAGTCATCCATAATTAGGGAAGCAAATAAGCAACATGTGAGATGTCAGAAATGCTTAGAATTTGGACATTGGACTTATG
AATGTACAGGAAAAAGAAAATACCTACATAGGCCTTCAAGAACAGCAGAACTAAAGAAAGCTTTAAAAGAGAAAGAAAAC
AGATTATTATTACAACAAAGCATTGGAGAAACTAATGTAGAAAAAAAGACCAAGAAAAAAAGGTCTAGTGTAAGTTCCAG
TAGCAATAGCAGTGGCAGT

Library Parental gene expression (RPM)
SRP012922_ascending_colon 2 .14 RPM
SRP012922_cerebellum 1 .79 RPM
SRP012922_heart 1 .62 RPM
SRP012922_kidney 0 .82 RPM
SRP012922_liver 0 .46 RPM
SRP012922_lung 1 .53 RPM
SRP012922_quadricep_muscle 1 .21 RPM
SRP012922_spleen 2 .29 RPM



Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000031203 ortholog_one2one 1 retrogene
retro_cfam_643,
Choloepus hoffmanni ENSCHOG00000001420 ortholog_one2one 9 retrogenes
retro_chof_1243, retro_chof_1263, retro_chof_1773, retro_chof_2048, retro_chof_2132, retro_chof_2183, retro_chof_501, retro_chof_790, retro_chof_923,
Myotis lucifugus ENSMLUG00000011366 ortholog_one2many 4 retrogenes
retro_mluc_172, retro_mluc_2240, retro_mluc_2241, retro_mluc_2574,
Monodelphis domestica ENSMODG00000013827 ortholog_one2one 1 retrogene
retro_mdom_1405,
Mus musculus ENSMUSG00000018239 ortholog_one2many 1 retrogene
retro_mmus_269,
Otolemur garnettii ENSOGAG00000032171 ortholog_one2one 1 retrogene
retro_ogar_3011,
Pongo abelii ENSPPYG00000015776 ortholog_one2one 1 retrogene
retro_pabe_2395,
Rattus norvegicus ENSRNOG00000006943 ortholog_one2one 3 retrogenes
retro_rnor_2037, retro_rnor_2528, retro_rnor_801,
Sorex araneus ENSSARG00000007221 ortholog_one2one 1 retrogene
retro_sara_639,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_257 63.41 70.80
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Download FASTA sequences of all ENSDNOG00000017302 retrocopies