Parental gene:

TOX4, ENSCHOG00000000714

Aliases:None
Description:TOX high mobility group box family member 4 [Source:HGNC Symbol;Acc:20161]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_3092:26617..42473(+)


>ENSCHOG00000000714
ATGGAGTTTCCCGGAGGAAATGACAATTACCTGACGATCACAGGGCCTTCGCACCCCTTCCTGTCCGGGGCCGAGNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGA
CTTGGACCATTCTATAGGAACTCAGTACAGCGCCAACCCACCTGTTACAATTGATGTACCAATGACAGACATGACATCTG
GCTTGATGGGGCATAGCCAGCTGACCACCATTGACCAGTCAGAATTGAGTTCTCAACTTGGTTTGAGCTTAGGGGGTGGC
ACCATCCTGCCACCTGCCCAGTCACCTGAGGATCGTCTTTCAACAACCCCTTCACCTACTAGTTCACTTCATGAGGATGG
TGTTGAGGACTTCCGGAGGCAACTTCCCAGCCAGAAGACAGTTGTAGTGGAAGCAGGAAAAAAGCAGAAGGCTCCAAAGA
AGAGAAAGAAGAAAGATCCTAATGAGCCTCAGAAACCAGTTTCAGCATATGCGTTATTCTTCCGTGATACACAGGCTGCC
ATCAAGGGACAGAATCCCAATGCCACTTTTGGGGAGGTTTCAAAAATTGTGGCCTCCATGTGGGACAGTCTTGGAGAAGA
GCAAAAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNGCCACGGTGGAGACAGTAGAATTGGATCCAGTGCCAGCACCCCAGACTCCTTCTCCACCTCCTGTGGCT
ACCGTTAACCCAGCATCTCCAGCACCAGCCTCAACAGAGCCCCCTGCCCTGTCGCCTTCCATTGTTGTTAACTCCACTCT
TTCATCCTATGTGGCAAATCAGGCATCTTCTGGGGCTGGGGGTCAGCCCAATATCACCAAATTGATTATTACCAAACAGA
TGTTACCCTCTTCTATTACCATGTCCCAAGGAGGGATGGTTACCGTTATCCCAGCCACAGTGGTGACCTCCCGGGGGCTC
CAGCTAGGCCAAACCAGTACAGCTACTATCCAACCCAGTCAACAAGCCCAGATAGTCACTCGGTCAGTGTTGCAAGCAGC
AGCAGCAGCTGCTGCTTCTATGCAGCTGCCTCCACCCCGACTACAGCCACCTCCATTACAACAGATGCCTCAGCCCCCAA
CTCAGCAGCAAGTGACCATACTGCAGCAGCCTCCCCCACTCCAGGCTATGCAACAGCCTCCACCTCAGAAAGTTCGAATC
AATTTACAGCAACAGCCACCTCCTCTGCAGATCAAGAATATGCCTCCACCCACTCTGAAAATGCAGGCGACCTTAGTCCC
ACCAGCTGTGGAAAGTAGTCCTGAACGGCCTATGAACAGTAGTCCTGAGACCCACACAGTGGAGACAACCTCTCCTGAGA
TCATCTGTGAGATGATTACAGATGTAGTTCCTGAGGTTGAATCTCCACAGATGGATGTTCAGTTGGTGAGTGGCTCTCCT
ATGACACTGTCACCCCAGCCTCGATGTGTAAGGTCAGGTTGTGAGAATCCTCCTGTTGTGAGCAAGGACTGGGACAATGA
GTACTGCAGCAATGAGTGTGTGGTGAAGCACTGCAGGGATGTATTCTTGGCCTGGGTAGCCTCCAGAAATTCAAACACAG
TTGTGTTTGTGAAATAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000006261 ortholog_one2one 1 retrogene
retro_amel_858,
Canis familiaris ENSCAFG00000005647 ortholog_one2one 2 retrogenes
retro_cfam_1625, retro_cfam_1698,
Homo sapiens ENSG00000092203 ortholog_one2one 1 retrogene
retro_hsap_2970,
Macropus eugenii ENSMEUG00000010501 ortholog_one2one 1 retrogene
retro_meug_1384,
Mustela putorius furo ENSMPUG00000000181 ortholog_one2one 1 retrogene
retro_mputfur_718,
Mus musculus ENSMUSG00000016831 ortholog_one2many 1 retrogene
retro_mmus_11,
Nomascus leucogenys ENSNLEG00000014556 ortholog_one2one 1 retrogene
retro_nleu_2027,
Pongo abelii ENSPPYG00000005598 ortholog_one2one 1 retrogene
retro_pabe_2463,
Pan troglodytes ENSPTRG00000006126 ortholog_one2one 1 retrogene
retro_ptro_2008,
Sus scrofa ENSSSCG00000029203 ortholog_one2one 1 retrogene
retro_sscr_361,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_631 77.47 51.94
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2. retro_chof_2239 85.03 50.32
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Download FASTA sequences of all ENSCHOG00000000714 retrocopies