Parental gene: | FAM20B, ENSCHOG00000005236 |
| Aliases: | None |
| Description: | family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_2374:1033..20418(+) |
>ENSCHOG00000005236
ATGAAGCTAAAGCAGCGAGTCGTGCTGTTAGCAATTCTTCTTGTCATCTTTATCTTCACCAAAGTTTTCCTGATTGATAA
TTTAGATACATCAGCTGCCAACCGGGAGGATCAGAGGGCTTTTCACCGAATGATGGCTGGCTTGCGGGTGGAGCTGAAAC
CCAAGCTGGACCACACCTTGCAGTCTCCCTGGGAGATTGCAGCCCAATGGGTGGTTCCCCGGGAAGTGTACCCTGAAGAG
ACACCAGAACTGGGGGCAATCATGCATGCCATGGCCACCAAGAAAATCATTAAAGCTGATGTGGGTTATAAAGGGACACA
ACTGAAAGCCTTACTTATACTTGAAGGAGGTCAAAAAGTTGTCTTCAAACCTAAGCGGTATAGCCGAGATTATGTGGTAG
AAGGGGAACCATATGCCGGTTATGATAGACACAATGCAGAGGTAGCAGCCTTTCATTTGGACAGGATTCTGGGCTTCCGT
CGAGCCCCCTTGGTGGTTGGCAGATTTATTAATCTGCGGACAGAGATCAAGCCTGTTGCCACGGAGCAGCTGTTGAGCAC
CTTTCTAACTGTAGGAAACAATACTTGCTTCTATGGGAAGTGTTATTACTGCCGAGAAACAGAGCCAGCTTGTGCCGATG
GAGACACGATGGAGGGATCTGTCACACTCTGGCTTCCAGATGTGTGGCCTCTGCAGAAACACCGACATCCATGGGGCAGA
ACTTACCGAGAGGGCAAATTGGCCAGGTGGGAGTATGACGAGAGCTACTGCGACGCTGTGAAGAAAACGTCTCCTTATGA
TTCTGGCCCACGCCTCCTGGACATCATTGACACAGCTGTGTTTGATTATCTCATTGGCAATGCTGACCGCCATCACTATG
AGAGCTTTCAAGATGATGAAGGCGCTAGTATGCTCATCCTTCTTGATAATGCCAAAAGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCGGGTTTCTACTTGGAACAGACTAAACTACCTGAAGAA
TGGTGTGCTGAAGTCTGCCTTAAAATCTGCCATGGCCCATGACCCCATCTCTCCAGTGCTTTCTGGGCCTCACCTGGATG
CTGTGGACCCACGGCTGCTGAGCATCCTGGCCACCGTGAAGCAGTGCACTGACCAGTTTGGGGTGGACTCTGTGCTAGTG
GAAGACAGGATGCCTCTCTCCCACTTGTAA
ATGAAGCTAAAGCAGCGAGTCGTGCTGTTAGCAATTCTTCTTGTCATCTTTATCTTCACCAAAGTTTTCCTGATTGATAA
TTTAGATACATCAGCTGCCAACCGGGAGGATCAGAGGGCTTTTCACCGAATGATGGCTGGCTTGCGGGTGGAGCTGAAAC
CCAAGCTGGACCACACCTTGCAGTCTCCCTGGGAGATTGCAGCCCAATGGGTGGTTCCCCGGGAAGTGTACCCTGAAGAG
ACACCAGAACTGGGGGCAATCATGCATGCCATGGCCACCAAGAAAATCATTAAAGCTGATGTGGGTTATAAAGGGACACA
ACTGAAAGCCTTACTTATACTTGAAGGAGGTCAAAAAGTTGTCTTCAAACCTAAGCGGTATAGCCGAGATTATGTGGTAG
AAGGGGAACCATATGCCGGTTATGATAGACACAATGCAGAGGTAGCAGCCTTTCATTTGGACAGGATTCTGGGCTTCCGT
CGAGCCCCCTTGGTGGTTGGCAGATTTATTAATCTGCGGACAGAGATCAAGCCTGTTGCCACGGAGCAGCTGTTGAGCAC
CTTTCTAACTGTAGGAAACAATACTTGCTTCTATGGGAAGTGTTATTACTGCCGAGAAACAGAGCCAGCTTGTGCCGATG
GAGACACGATGGAGGGATCTGTCACACTCTGGCTTCCAGATGTGTGGCCTCTGCAGAAACACCGACATCCATGGGGCAGA
ACTTACCGAGAGGGCAAATTGGCCAGGTGGGAGTATGACGAGAGCTACTGCGACGCTGTGAAGAAAACGTCTCCTTATGA
TTCTGGCCCACGCCTCCTGGACATCATTGACACAGCTGTGTTTGATTATCTCATTGGCAATGCTGACCGCCATCACTATG
AGAGCTTTCAAGATGATGAAGGCGCTAGTATGCTCATCCTTCTTGATAATGCCAAAAGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTCGGGTTTCTACTTGGAACAGACTAAACTACCTGAAGAA
TGGTGTGCTGAAGTCTGCCTTAAAATCTGCCATGGCCCATGACCCCATCTCTCCAGTGCTTTCTGGGCCTCACCTGGATG
CTGTGGACCCACGGCTGCTGAGCATCCTGGCCACCGTGAAGCAGTGCACTGACCAGTTTGGGGTGGACTCTGTGCTAGTG
GAAGACAGGATGCCTCTCTCCCACTTGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000006175 | ortholog_one2one | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000005651 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000116199 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002484 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006654 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006260 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000015580 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012751 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000000466 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000001725 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000005086 | ortholog_one2one | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000005482 | ortholog_one2one | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_799 | 75.46 | 66.01 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_868 | 78.08 | 63.33 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_1509 | 83.80 | 68.95 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1926 | 78.51 | 55.75 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2615 | 75.58 | 62.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_2629 | 79.46 | 62.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000005236 retrocopies