Parental gene:

FAM20B, ENSG00000116199

Aliases:FAM20B, gxk1
Description:family with sequence similarity 20, member B [Source:HGNC Symbol;Acc:23017]
Organism:Human (Homo sapiens)
Coordinates:1:178994938..179045697(+)


>ENSG00000116199
ATGAAGCTAAAGCAGCGAGTCGTGCTGTTAGCAATTCTCCTTGTCATTTTTATCTTCACCAAAGTTTTCCTGATTGACAA
CTTAGATACATCAGCTGCCAACCGGGAGGACCAGAGGGCCTTTCACCGAATGATGACTGGCTTGCGGGTGGAGCTGGCAC
CCAAGCTGGACCATACCTTGCAGTCTCCCTGGGAGATTGCAGCCCAGTGGGTGGTTCCCCGGGAAGTGTACCCTGAAGAG
ACACCAGAGCTGGGGGCAGTCATGCATGCCATGGCCACCAAGAAAATCATTAAAGCTGATGTGGGTTATAAAGGGACACA
GCTGAAAGCCTTACTGATACTTGAAGGAGGCCAGAAAGTTGTTTTCAAACCTAAGCGGTATAGCCGAGACCATGTGGTGG
AAGGGGAACCGTATGCTGGTTATGATAGACACAATGCAGAGGTAGCAGCCTTTCACTTGGACAGGATTCTGGGTTTCCAC
CGAGCCCCCTTGGTAGTTGGCAGATTTGTTAATCTTCGGACAGAGATCAAACCTGTCGCCACAGAGCAGCTGTTGAGCAC
CTTCCTAACTGTAGGAAACAATACTTGTTTTTATGGGAAGTGCTATTACTGCCGAGAAACAGAACCAGCTTGTGCTGATG
GAGACATAATGGAGGGATCTGTCACACTTTGGCTTCCAGATGTGTGGCCTCTGCAGAAGCACCGTCACCCATGGGGCAGG
ACTTACCGAGAAGGCAAATTGGCCAGGTGGGAGTATGATGAGAGCTACTGTGATGCTGTGAAGAAAACGTCCCCTTATGA
CTCTGGCCCGCGCCTCTTGGACATCATTGACACAGCTGTCTTTGATTACCTGATTGGCAATGCTGACCGCCATCACTATG
AGAGCTTTCAAGATGATGAAGGCGCTAGTATGCTCATCCTTCTTGATAATGCCAAAAGCTTTGGGAACCCCTCGCTGGAT
GAAAGAAGCATTCTTGCCCCTCTCTATCAGTGTTGCATCATTCGGGTGTCCACCTGGAACAGACTGAACTACCTAAAGAA
TGGTGTGCTAAAGTCTGCCTTAAAATCTGCCATGGCCCATGACCCCATCTCCCCAGTGCTCTCTGATCCTCATCTGGACG
CCGTGGACCAGCGGCTCCTGAGTGTCCTGGCCACCGTGAAGCAGTGCACCGACCAGTTTGGGATGGACACAGTACTGGTG
GAAGACAGGATGCCTCTCTCACACTTGTAA

Library Parental gene expression (RPM)
bodymap2_liver 32 .83 RPM
bodymap2_lung 89 .42 RPM
bodymap2_breast 129 .44 RPM
bodymap2_adipose 111 .02 RPM
bodymap2_adrenal 108 .32 RPM
bodymap2_skeletal_muscle 92 .74 RPM
bodymap2_thyroid 96 .27 RPM
bodymap2_prostate 132 .20 RPM
bodymap2_colon 172 .36 RPM
bodymap2_testis 93 .17 RPM
bodymap2_brain 98 .26 RPM
bodymap2_heart 99 .36 RPM
bodymap2_white_blood_cells 68 .95 RPM
bodymap2_lymph_node 67 .96 RPM
bodymap2_ovary 105 .46 RPM
bodymap2_kidney 86 .59 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005236 ortholog_one2one 6 retrogenes
retro_chof_1509, retro_chof_1926, retro_chof_2615, retro_chof_2629, retro_chof_799, retro_chof_868,
Dasypus novemcinctus ENSDNOG00000006175 ortholog_one2one 2 retrogenes
retro_dnov_1484, retro_dnov_2346,
Echinops telfairi ENSETEG00000005651 ortholog_one2one 1 retrogene
retro_etel_1128,
Gorilla gorilla ENSGGOG00000002484 ortholog_one2one 1 retrogene
retro_ggor_1899,
Macropus eugenii ENSMEUG00000006654 ortholog_one2one 1 retrogene
retro_meug_414,
Macaca mulatta ENSMMUG00000006260 ortholog_one2one 1 retrogene
retro_mmul_1533,
Nomascus leucogenys ENSNLEG00000015580 ortholog_one2one 1 retrogene
retro_nleu_592,
Otolemur garnettii ENSOGAG00000012751 ortholog_one2one 1 retrogene
retro_ogar_2800,
Pongo abelii ENSPPYG00000000466 ortholog_one2one 2 retrogenes
retro_pabe_2268, retro_pabe_2269,
Pan troglodytes ENSPTRG00000001725 ortholog_one2one 1 retrogene
retro_ptro_1845,
Ictidomys tridecemlineatus ENSSTOG00000005086 ortholog_one2one 2 retrogenes
retro_itri_441, retro_itri_539,
Tarsius syrichta ENSTSYG00000005482 ortholog_one2one 3 retrogenes
retro_tsyr_2065, retro_tsyr_2124, retro_tsyr_89,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2730 79.43 94.13
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Download FASTA sequences of all ENSG00000116199 retrocopies