Parental gene: | AMD1, ENSCHOG00000009171 |
| Aliases: | None |
| Description: | adenosylmethionine decarboxylase 1 [Source:HGNC Symbol;Acc:457] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_2819:147..12421(+) |
>ENSCHOG00000009171
TTTTTCAAAGGGACGGAGAAGCTGCTGGAGGTTTGGTTCTCCCGGCAGCAGCCCGACGCAAACCAAGGATCTGGGGATCT
TCGCACCATTCCAAGATCTGAGTGGGACATACTTTTGAAGGATGTGCAATGTTCAATCATAAGTGTGACAAAAACTGACA
AGCAGGAAGCTTATGTACTCAGTGAGAGTAGCATGGTCTCCAAGAGACGTTTCATTTTGAAGACATGTGGTACCACCCTC
TTACTGAAAGCACTGGTTCCCCTGTTGAAGCTTGCTAGGGATTACAGTGGGTTTGACTCAATTCAAAGCTTCTTTTATTC
TCGTAAGAATTTCATGAAGCCTTCTCACCAAGGGTACCCACACCGGAATTTCCAGGAAGAAATAGAGTTTCTTAATGCAA
TTTTCCCAAATGGAGCAGCATATTGTATGGGACGGATGAATTCCGACTGTTGGTACTTATATACTCTGGATTTCCCAGAG
AGTCGTGTAATCAGTCAGCCAGATCAAACCCTGGAAATTCTGATGAGTGAGCTTGACCCAGCAGTTATGGACCAGTTCTA
CATGAAAGATGGTGTTACTGCAAAGGATGTCACTCGTGAGAGTGGAATTCGTGACCTGATACCAGGTTCTGTCATTGATG
CCACACTGTTCAATCCTTGTGGGTATTCGATGAATGGAATGAAATCGGACGGAACTTATTGGACTATTCACATCACTCCA
GAACCAGAATTTTCTTATGTTAGCTTTGAAACAAACATAAGTCAGACCTCCTATGATGACCTGATCAGGAAAGTTGTGGA
AGTCTTCAAGCCAGGAAAATTTGTGACCACCTTGTTTGTAAATCAGAGTTCTAAATGTCGCACAGTGCTTTCTTCGCCCC
AGAAGATTGAAGGTTTTAAACGTCTTGATTGTCAGAGTGCTATGTTCAATGATTACAACTTTGTTTTTACTAGCTTTGCT
AAGAATCAGCAACAACAGCAGAGTTGA
TTTTTCAAAGGGACGGAGAAGCTGCTGGAGGTTTGGTTCTCCCGGCAGCAGCCCGACGCAAACCAAGGATCTGGGGATCT
TCGCACCATTCCAAGATCTGAGTGGGACATACTTTTGAAGGATGTGCAATGTTCAATCATAAGTGTGACAAAAACTGACA
AGCAGGAAGCTTATGTACTCAGTGAGAGTAGCATGGTCTCCAAGAGACGTTTCATTTTGAAGACATGTGGTACCACCCTC
TTACTGAAAGCACTGGTTCCCCTGTTGAAGCTTGCTAGGGATTACAGTGGGTTTGACTCAATTCAAAGCTTCTTTTATTC
TCGTAAGAATTTCATGAAGCCTTCTCACCAAGGGTACCCACACCGGAATTTCCAGGAAGAAATAGAGTTTCTTAATGCAA
TTTTCCCAAATGGAGCAGCATATTGTATGGGACGGATGAATTCCGACTGTTGGTACTTATATACTCTGGATTTCCCAGAG
AGTCGTGTAATCAGTCAGCCAGATCAAACCCTGGAAATTCTGATGAGTGAGCTTGACCCAGCAGTTATGGACCAGTTCTA
CATGAAAGATGGTGTTACTGCAAAGGATGTCACTCGTGAGAGTGGAATTCGTGACCTGATACCAGGTTCTGTCATTGATG
CCACACTGTTCAATCCTTGTGGGTATTCGATGAATGGAATGAAATCGGACGGAACTTATTGGACTATTCACATCACTCCA
GAACCAGAATTTTCTTATGTTAGCTTTGAAACAAACATAAGTCAGACCTCCTATGATGACCTGATCAGGAAAGTTGTGGA
AGTCTTCAAGCCAGGAAAATTTGTGACCACCTTGTTTGTAAATCAGAGTTCTAAATGTCGCACAGTGCTTTCTTCGCCCC
AGAAGATTGAAGGTTTTAAACGTCTTGATTGTCAGAGTGCTATGTTCAATGATTACAACTTTGTTTTTACTAGCTTTGCT
AAGAATCAGCAACAACAGCAGAGTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003500 | ortholog_one2one | 1 retrogene | |
| Bos taurus | ENSBTAG00000003342 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000003905 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000005257 | ortholog_one2one | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000006867 | ortholog_one2one | 10 retrogenes | |
| Equus caballus | ENSECAG00000011198 | ortholog_one2many | 4 retrogenes | |
| Felis catus | ENSFCAG00000028033 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000123505 | ortholog_one2one | 5 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006466 | ortholog_one2one | 5 retrogenes | |
| Loxodonta africana | ENSLAFG00000013203 | possible_ortholog | 2 retrogenes | |
| Macropus eugenii | ENSMEUG00000010630 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000005666 | ortholog_one2one | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000000535 | ortholog_one2many | 6 retrogenes | |
| Mus musculus | ENSMUSG00000075232 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000012818 | ortholog_one2one | 4 retrogenes | |
| Otolemur garnettii | ENSOGAG00000030150 | possible_ortholog | 7 retrogenes | |
| Pongo abelii | ENSPPYG00000016924 | ortholog_one2one | 4 retrogenes | |
| Pan troglodytes | ENSPTRG00000018501 | ortholog_one2one | 5 retrogenes | |
| Rattus norvegicus | ENSRNOG00000000585 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000014387 | ortholog_one2one | 3 retrogenes | |
| Sus scrofa | ENSSSCG00000004392 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000205 | ortholog_one2one | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_74 | 79.76 | 75.61 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_238 | 85.71 | 63.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_332 | 98.92 | 83.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_425 | 80.23 | 78.66 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_628 | 81.44 | 50.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_chof_968 | 80.97 | 99.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_chof_1327 | 58.94 | 72.56 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_chof_2200 | 81.98 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_chof_2691 | 72.48 | 76.52 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000009171 retrocopies