Parental gene:

ENSCHOG00000001213

Aliases:None
Description:None
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_678:5943..24283(+)


>ENSCHOG00000001213
ATGGCGCTGAAGCGGATTCAGAAAGAACTGAGTGATCTGCAACGTGATCCACCTGCTCACTGTTCCGCTGGACCTGTGGG
AGATGACTTGTTCCACTGGCAAGCAACTATTATGGGGCCTCCCGATAGTGCATATCAAGGTGGAGTCTTCTTTCTCACTG
TACATTTTCCGACAGACTATCCTTTTAAACCACCAAAGATTGCTTTCACAACAAAAATTTACCATCCAAACATAAACAGT
AATGGAAGTATTTGTCTTGATATCCTGAGGTCACAGTGGTCACCAGCTCTGACAGTATCAAAAGTTTTATTGTCCATATG
CTCTTTACTTTGTGATCCTAATCCAGATGACCCTTTAGTACCAGATATTGCACAAATCTATAAATCAGACAAAGAAAAAT
ACAACAGACACGCAAGAGAATGGACTCAGAAATATGCAATGTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020796 ortholog_one2many 5 retrogenes
retro_btau_1174, retro_btau_1314, retro_btau_1773, retro_btau_1774, retro_btau_752,
Choloepus hoffmanni ENSCHOG00000001515 within_species_paralog 1 retrogene
retro_chof_1084,
Choloepus hoffmanni ENSCHOG00000004649 within_species_paralog 2 retrogenes
retro_chof_2549, retro_chof_439,
Choloepus hoffmanni ENSCHOG00000007325 other_paralog 3 retrogenes
retro_chof_1756, retro_chof_2077, retro_chof_2358,
Choloepus hoffmanni ENSCHOG00000010341 other_paralog 2 retrogenes
retro_chof_1304, retro_chof_674,
Dasypus novemcinctus ENSDNOG00000013821 ortholog_one2many 1 retrogene
retro_dnov_537,
Echinops telfairi ENSETEG00000002280 ortholog_one2many 2 retrogenes
retro_etel_1363, retro_etel_1600,
Homo sapiens ENSG00000072401 ortholog_one2many 2 retrogenes
retro_hsap_4723, retro_hsap_4725,
Macropus eugenii ENSMEUG00000007238 ortholog_many2many 1 retrogene
retro_meug_1090,
Microcebus murinus ENSMICG00000010253 ortholog_one2many 1 retrogene
retro_mmur_586,
Myotis lucifugus ENSMLUG00000005710 ortholog_one2many 13 retrogenes
retro_mluc_1019, retro_mluc_1597, retro_mluc_1855, retro_mluc_1914, retro_mluc_1971, retro_mluc_2053, retro_mluc_650, retro_mluc_687, retro_mluc_703, retro_mluc_778, retro_mluc_803, retro_mluc_867, retro_mluc_878,
Mus musculus ENSMUSG00000019927 ortholog_one2many 22 retrogenes
retro_mmus_3405, retro_mmus_3406, retro_mmus_3407, retro_mmus_3409, retro_mmus_3430, retro_mmus_3432, retro_mmus_3434, retro_mmus_3435, retro_mmus_3436, retro_mmus_3563, retro_mmus_3564, retro_mmus_3565, retro_mmus_3566, retro_mmus_3567, retro_mmus_3587, retro_mmus_3589, retro_mmus_3590, retro_mmus_3591, retro_mmus_3592, retro_mmus_3593, retro_mmus_3594, retro_mmus_3595,
Procavia capensis ENSPCAG00000006998 ortholog_one2many 1 retrogene
retro_pcap_117,
Pteropus vampyrus ENSPVAG00000007394 ortholog_one2many 2 retrogenes
retro_pvam_1139, retro_pvam_363,
Sarcophilus harrisii ENSSHAG00000010481 ortholog_one2many 1 retrogene
retro_shar_714,
Tarsius syrichta ENSTSYG00000011229 ortholog_one2many 3 retrogenes
retro_tsyr_1217, retro_tsyr_1430, retro_tsyr_501,
Tursiops truncatus ENSTTRG00000009244 ortholog_one2many 8 retrogenes
retro_ttru_137, retro_ttru_1649, retro_ttru_1670, retro_ttru_1793, retro_ttru_1853, retro_ttru_376, retro_ttru_443, retro_ttru_96,
Vicugna pacos ENSVPAG00000006944 ortholog_one2many 5 retrogenes
retro_vpac_343, retro_vpac_513, retro_vpac_561, retro_vpac_585, retro_vpac_587,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_619 69.59 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_chof_662 74.49 66.67
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_chof_683 77.03 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_chof_728 86.08 53.74
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_chof_920 64.49 71.43
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_chof_1091 58.74 96.60
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_chof_1169 76.32 76.19
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_chof_1465 76.00 98.64
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_chof_1675 76.92 70.75
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_chof_1731 77.55 100.00
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_chof_2071 90.91 73.47
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_chof_2089 77.31 80.27
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_chof_2098 75.51 99.32
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_chof_2101 75.51 66.67
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_chof_2190 100.00 72.79
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_chof_2266 70.75 100.00
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_chof_2364 81.06 88.44
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_chof_2481 64.10 53.06
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_chof_2485 98.33 81.63
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_chof_2514 84.62 53.06
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_chof_2637 93.62 95.24
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSCHOG00000001213 retrocopies