Parental gene: | ENSCJAG00000017209 |
| Aliases: | None |
| Description: | None |
| Organism: | Marmoset (Callithrix jacchus) |
| Coordinates: | 15:67460162..67464125(-) |
>ENSCJAG00000017209
GGTCCAAGCCGCAGCAGCTTCCCAGTGGGACGCCGCCACCCCCCCACGCTGCAAATGGTGCTGGAGGCGATGCAGGTGCT
GCAGGCAGAGGAGCAGCGCCAGGGCACATCGGTGGTAGCCATCAAGCGCTACATCCTGCGAAAGTACCCCGCAGCAGATG
GCCCTCGCTTCAAGTACCTGCTGAAGAACGCGCTGGCCACTGGCATGTGCCGTGGCCTCCTCGCCAGGCCCCCCCACTTA
AAAACCAGGGGGGCCACTGGCAGCTTCCAATTAGTTACCAACCACGAGAGGACAATCAAGCCCAGGAAGACGGCCTCCCC
GAAGGCCCCCAGGAGAGCAGGCGTGGCCAAGGGGAAGGTCCCCAAGAAACCAGATGAGGCCAAGGAGGAGCCTCCCAAGG
CAGGCAAGGGGAAAAAGGGAGCCAAGAGTCCAGCGGAGGTGCAGAAGCCTCCCCTCAAGCCAGGCACAGACACAGAAAAA
GCTTGCAAAGAAAGCAGCAAGGCCAAGGACACCGAGGCACAGCCAGGTGAGGCTCAGAAGGTGCCCCCCAAGCCAGACAA
GGCCATGCGGGCCCCTTCTAATGACAGTGGGTTCAGCAGGAGGGCAGAGGTCAAAGGCAGCTGGAGGAGCCCAGGAGGTG
CTGAGGCCAGCAGGAAAACCAAAGCTGGGAGTAAGAGTTTAAGACCCACGGTCAGCAAGGTCAAGAGTGGTACTGCTTCC
CTAACCGAAAAGAAGTCGGTGGCCCGGGCCAAGGCCCAGTCCCAGGCCCCTGCCCCCACTGGGGCTGGGCAGGGGCCGAA
TGCCAAGGGTGCTTCTGCTAAGGCCGGTGGGTCCAAGGTGGTACCTGCACATCTGTCCAGGAAGACAGAGGCCCCTAAGG
GCTCGAGAACGGCTGGGCTGCCCATCGACATCAAGTTCCCATCATCCAAAGTGTCCAGCCAGAGGGCTGAAGCT
GGTCCAAGCCGCAGCAGCTTCCCAGTGGGACGCCGCCACCCCCCCACGCTGCAAATGGTGCTGGAGGCGATGCAGGTGCT
GCAGGCAGAGGAGCAGCGCCAGGGCACATCGGTGGTAGCCATCAAGCGCTACATCCTGCGAAAGTACCCCGCAGCAGATG
GCCCTCGCTTCAAGTACCTGCTGAAGAACGCGCTGGCCACTGGCATGTGCCGTGGCCTCCTCGCCAGGCCCCCCCACTTA
AAAACCAGGGGGGCCACTGGCAGCTTCCAATTAGTTACCAACCACGAGAGGACAATCAAGCCCAGGAAGACGGCCTCCCC
GAAGGCCCCCAGGAGAGCAGGCGTGGCCAAGGGGAAGGTCCCCAAGAAACCAGATGAGGCCAAGGAGGAGCCTCCCAAGG
CAGGCAAGGGGAAAAAGGGAGCCAAGAGTCCAGCGGAGGTGCAGAAGCCTCCCCTCAAGCCAGGCACAGACACAGAAAAA
GCTTGCAAAGAAAGCAGCAAGGCCAAGGACACCGAGGCACAGCCAGGTGAGGCTCAGAAGGTGCCCCCCAAGCCAGACAA
GGCCATGCGGGCCCCTTCTAATGACAGTGGGTTCAGCAGGAGGGCAGAGGTCAAAGGCAGCTGGAGGAGCCCAGGAGGTG
CTGAGGCCAGCAGGAAAACCAAAGCTGGGAGTAAGAGTTTAAGACCCACGGTCAGCAAGGTCAAGAGTGGTACTGCTTCC
CTAACCGAAAAGAAGTCGGTGGCCCGGGCCAAGGCCCAGTCCCAGGCCCCTGCCCCCACTGGGGCTGGGCAGGGGCCGAA
TGCCAAGGGTGCTTCTGCTAAGGCCGGTGGGTCCAAGGTGGTACCTGCACATCTGTCCAGGAAGACAGAGGCCCCTAAGG
GCTCGAGAACGGCTGGGCTGCCCATCGACATCAAGTTCCCATCATCCAAAGTGTCCAGCCAGAGGGCTGAAGCT
| Library | Parental gene expression (RPM) |
|---|---|
| SRP051959_spleen | 0 .02 RPM |
| SRP051959_skeletal_muscle | 0 .00 RPM |
| SRP051959_lymph_node | 0 .02 RPM |
| SRP051959_lung | 0 .00 RPM |
| SRP051959_liver | 0 .00 RPM |
| SRP051959_kidney | 0 .00 RPM |
| SRP051959_heart | 0 .00 RPM |
| SRP051959_colon | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Felis catus | ENSFCAG00000000094 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000178804 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000000735 | ortholog_one2many | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000025226 | ortholog_one2many | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000029379 | ortholog_one2many | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000010371 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000013414 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000015380 | ortholog_one2many | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007110 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000011276 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cjac_981 | 74.06 | 91.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cjac_3976 | 71.70 | 99.69 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCJAG00000017209 retrocopies