Parental gene:

ENSCJAG00000017209

Aliases:None
Description:None
Organism:Marmoset (Callithrix jacchus)
Coordinates:15:67460162..67464125(-)


>ENSCJAG00000017209
GGTCCAAGCCGCAGCAGCTTCCCAGTGGGACGCCGCCACCCCCCCACGCTGCAAATGGTGCTGGAGGCGATGCAGGTGCT
GCAGGCAGAGGAGCAGCGCCAGGGCACATCGGTGGTAGCCATCAAGCGCTACATCCTGCGAAAGTACCCCGCAGCAGATG
GCCCTCGCTTCAAGTACCTGCTGAAGAACGCGCTGGCCACTGGCATGTGCCGTGGCCTCCTCGCCAGGCCCCCCCACTTA
AAAACCAGGGGGGCCACTGGCAGCTTCCAATTAGTTACCAACCACGAGAGGACAATCAAGCCCAGGAAGACGGCCTCCCC
GAAGGCCCCCAGGAGAGCAGGCGTGGCCAAGGGGAAGGTCCCCAAGAAACCAGATGAGGCCAAGGAGGAGCCTCCCAAGG
CAGGCAAGGGGAAAAAGGGAGCCAAGAGTCCAGCGGAGGTGCAGAAGCCTCCCCTCAAGCCAGGCACAGACACAGAAAAA
GCTTGCAAAGAAAGCAGCAAGGCCAAGGACACCGAGGCACAGCCAGGTGAGGCTCAGAAGGTGCCCCCCAAGCCAGACAA
GGCCATGCGGGCCCCTTCTAATGACAGTGGGTTCAGCAGGAGGGCAGAGGTCAAAGGCAGCTGGAGGAGCCCAGGAGGTG
CTGAGGCCAGCAGGAAAACCAAAGCTGGGAGTAAGAGTTTAAGACCCACGGTCAGCAAGGTCAAGAGTGGTACTGCTTCC
CTAACCGAAAAGAAGTCGGTGGCCCGGGCCAAGGCCCAGTCCCAGGCCCCTGCCCCCACTGGGGCTGGGCAGGGGCCGAA
TGCCAAGGGTGCTTCTGCTAAGGCCGGTGGGTCCAAGGTGGTACCTGCACATCTGTCCAGGAAGACAGAGGCCCCTAAGG
GCTCGAGAACGGCTGGGCTGCCCATCGACATCAAGTTCCCATCATCCAAAGTGTCCAGCCAGAGGGCTGAAGCT

Library Parental gene expression (RPM)
SRP051959_colon 0 .00 RPM
SRP051959_heart 0 .00 RPM
SRP051959_kidney 0 .00 RPM
SRP051959_liver 0 .00 RPM
SRP051959_lung 0 .00 RPM
SRP051959_lymph_node 0 .02 RPM
SRP051959_skeletal_muscle 0 .00 RPM
SRP051959_spleen 0 .02 RPM



Species Parental gene accession Homology type Retrogenes number
Felis catus ENSFCAG00000000094 ortholog_one2many 2 retrogenes
retro_fcat_1139, retro_fcat_416,
Homo sapiens ENSG00000178804 ortholog_one2many 1 retrogene
retro_hsap_2799,
Gorilla gorilla ENSGGOG00000000735 ortholog_one2many 1 retrogene
retro_ggor_1946,
Myotis lucifugus ENSMLUG00000025226 ortholog_one2many 2 retrogenes
retro_mluc_1278, retro_mluc_1318,
Oryctolagus cuniculus ENSOCUG00000029379 ortholog_one2many 1 retrogene
retro_ocun_1483,
Ochotona princeps ENSOPRG00000010371 ortholog_one2many 2 retrogenes
retro_opri_403, retro_opri_624,
Pongo abelii ENSPPYG00000013414 ortholog_one2many 1 retrogene
retro_pabe_2225,
Pan troglodytes ENSPTRG00000015380 ortholog_one2many 1 retrogene
retro_ptro_1896,
Pteropus vampyrus ENSPVAG00000007110 ortholog_one2many 1 retrogene
retro_pvam_808,
Tursiops truncatus ENSTTRG00000011276 ortholog_one2many 1 retrogene
retro_ttru_1111,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cjac_981 74.06 91.51
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2. retro_cjac_3976 71.70 99.69
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Download FASTA sequences of all ENSCJAG00000017209 retrocopies