Parental gene:

H1FOO, ENSG00000178804

Aliases:H1FOO, osH1
Description:H1 histone family, member O, oocyte-specific [Source:HGNC Symbol;Acc:18463]
Organism:Human (Homo sapiens)
Coordinates:3:129262056..129270310(+)


>ENSG00000178804
ATGGCTCCTGGGAGCGTCACCAGCGACATCTCACCCTCCTCGACTTCCACAGCAGGATCATCCAGGTCTCCTGAATCTGA
AAAGCCAGGCCCGAGCCACGGCGGTGTCCCACCAGGAGGCCCGAGCCACAGCAGCCTCCCGGTGGGACGCCGCCACCCCC
CGGTGCTACGCATGGTGCTGGAGGCGCTGCAGGCTGGGGAGCAGCGCCGGGGCACGTCGGTGGCAGCTATCAAGCTCTAC
ATCCTGCACAAGTACCCAACAGTGGACGTCCTCCGCTTCAAGTACCTGCTGAAGCAGGCGCTGGCCACTGGCATGCGCCG
TGGCCTCCTCGCCAGGCCCCTCAACTCCAAAGCCAGGGGGGCCACTGGCAGCTTCAAATTAGTTCCCAAGCACAAGAAGA
AAATCCAGCCCAGGAAGATGGCCCCCGCGACGGCTCCCAGGAGAGCGGGTGAGGCCAAGGGGAAGGGCCCCAAGAAACCA
AGTGAGGCCAAGGAGGACCCTCCCAACGTGGGCAAGGTGAAAAAGGCAGCCAAGAGGCCAGCAAAGGTGCAGAAGCCTCC
TCCCAAGCCAGGCGCAGCCACAGAGAAGGCTCGCAAGCAAGGCGGCGCGGCCAAGGACACCAGGGCACAGTCGGGAGAGG
CTAGGAAGGTGCCCCCCAAGCCAGACAAGGCCATGCGGGCACCTTCCAGTGCTGGTGGGCTCAGCAGGAAGGCAAAGGCC
AAAGGCAGCAGGAGCAGCCAAGGAGATGCTGAGGCCTACAGGAAAACCAAAGCTGAGAGTAAGAGTTCAAAACCCACGGC
CAGCAAGGTCAAGAATGGTGCTGCTTCCCCGACCAAAAAGAAGGTGGTGGCCAAGGCCAAGGCCCCTAAAGCTGGGCAGG
GGCCAAACACCAAGGCTGCTGCTCCTGCTAAGGGCAGTGGGTCCAAGGTGGTACCTGCACATTTGTCCAGGAAGACAGAG
GCCCCCAAGGGCCCTAGAAAGGCTGGGCTGCCCATCAAGGCCTCATCATCCAAAGTGTCCAGCCAGAGGGCTGAAGCTTA
G

Library Parental gene expression (RPM)
bodymap2_adipose 0 .00 RPM
bodymap2_adrenal 0 .04 RPM
bodymap2_brain 0 .02 RPM
bodymap2_breast 0 .00 RPM
bodymap2_colon 0 .00 RPM
bodymap2_heart 0 .00 RPM
bodymap2_kidney 0 .00 RPM
bodymap2_liver 0 .00 RPM
bodymap2_lung 0 .00 RPM
bodymap2_lymph_node 0 .04 RPM
bodymap2_ovary 0 .00 RPM
bodymap2_prostate 0 .00 RPM
bodymap2_skeletal_muscle 0 .00 RPM
bodymap2_testis 1 .58 RPM
bodymap2_thyroid 0 .00 RPM
bodymap2_white_blood_cells 0 .00 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000017209 ortholog_one2many 2 retrogenes
retro_cjac_3976, retro_cjac_981,
Felis catus ENSFCAG00000000094 ortholog_one2one 2 retrogenes
retro_fcat_1139, retro_fcat_416,
Gorilla gorilla ENSGGOG00000000735 ortholog_one2one 1 retrogene
retro_ggor_1946,
Myotis lucifugus ENSMLUG00000025226 ortholog_one2one 2 retrogenes
retro_mluc_1278, retro_mluc_1318,
Oryctolagus cuniculus ENSOCUG00000029379 ortholog_one2one 1 retrogene
retro_ocun_1483,
Ochotona princeps ENSOPRG00000010371 ortholog_one2one 2 retrogenes
retro_opri_403, retro_opri_624,
Pongo abelii ENSPPYG00000013414 ortholog_one2one 1 retrogene
retro_pabe_2225,
Pan troglodytes ENSPTRG00000015380 ortholog_one2one 1 retrogene
retro_ptro_1896,
Pteropus vampyrus ENSPVAG00000007110 ortholog_one2one 1 retrogene
retro_pvam_808,
Tursiops truncatus ENSTTRG00000011276 ortholog_one2one 1 retrogene
retro_ttru_1111,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_2799 78.57 64.16
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Download FASTA sequences of all ENSG00000178804 retrocopies