Parental gene: | DTWD1, ENSCPOG00000003461 |
| Aliases: | None |
| Description: | None |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_23:27849157..27863190(+) |
>ENSCPOG00000003461
ATGTCTGTCAGTCCATCTGTATTTCTTAAAGAAAGTGAAGAAAACAGTGCAAAATGTGTGGAAACAAAGCAGTCACAGAC
TACCCTCATCACTTCAGAAGATCCCCTTCAAAACTTGTGCTTAGCATCTCAAGAAATTCTTCAAAAAGCTCAACGAAGTG
GGAGGTCAAGATGTGTCAAGTGTGGTGGCTCAAGGATGTTTTACTGTTACACGTGTTACGTCCCCGTTGAAAATGTACCA
GGCGGACAGATTCCTCTTGTGAAGCTGCCTCTGAAGATTGACATCATTAAACATCCAAACGAAACAGATGGCAAAAGCAC
GGCTATCCATGCGAAACTCTTAGCACCTGAGTTTGTAAACATTTATACGTACCCTTGCATTCCAGAATATGAAGAAAAGG
ACCATGAAGTCGCGCTTATTTTTCCTGGCCCTCAGTCTGTCTCAATAAAAGATATTTCTTTTCATCTGCAAAAAAGGATT
CAAAATAAAGGCAAAACTGATGACCTTGAGAGACCGTCTTTTAAACGCAAGAAAACTGAAGAGCAGGAGCGCTGTGATTT
GAATGACAGCAAATGCAAGGGTGCAACACTGAAAAGAGTAATCTTTATAGACAGCACCTGGAACCAGACCAACAAGATAG
TCAGTGACGAGCGGCTTCAGGGATTGTTACAAGTTGAGCTGAAAACAAGAAAAACTTGCTTCTGGCGCCATCAGAAGGGA
AAGCCGGAGACTTTCCTCTCCACAATTGAAGCCATTTACTACTTTCTGGTAGACTACCACACTGACATTTTAAAAGAGAA
ATACAAAGGACAATATGACAATCTTCTATTTTTCTATTCTTTTATGTACCAGTTGATAAAAAATGCCAAGTACTCTGGCA
CCAAGCAAACAACCAAACTTACCCATTAG
ATGTCTGTCAGTCCATCTGTATTTCTTAAAGAAAGTGAAGAAAACAGTGCAAAATGTGTGGAAACAAAGCAGTCACAGAC
TACCCTCATCACTTCAGAAGATCCCCTTCAAAACTTGTGCTTAGCATCTCAAGAAATTCTTCAAAAAGCTCAACGAAGTG
GGAGGTCAAGATGTGTCAAGTGTGGTGGCTCAAGGATGTTTTACTGTTACACGTGTTACGTCCCCGTTGAAAATGTACCA
GGCGGACAGATTCCTCTTGTGAAGCTGCCTCTGAAGATTGACATCATTAAACATCCAAACGAAACAGATGGCAAAAGCAC
GGCTATCCATGCGAAACTCTTAGCACCTGAGTTTGTAAACATTTATACGTACCCTTGCATTCCAGAATATGAAGAAAAGG
ACCATGAAGTCGCGCTTATTTTTCCTGGCCCTCAGTCTGTCTCAATAAAAGATATTTCTTTTCATCTGCAAAAAAGGATT
CAAAATAAAGGCAAAACTGATGACCTTGAGAGACCGTCTTTTAAACGCAAGAAAACTGAAGAGCAGGAGCGCTGTGATTT
GAATGACAGCAAATGCAAGGGTGCAACACTGAAAAGAGTAATCTTTATAGACAGCACCTGGAACCAGACCAACAAGATAG
TCAGTGACGAGCGGCTTCAGGGATTGTTACAAGTTGAGCTGAAAACAAGAAAAACTTGCTTCTGGCGCCATCAGAAGGGA
AAGCCGGAGACTTTCCTCTCCACAATTGAAGCCATTTACTACTTTCTGGTAGACTACCACACTGACATTTTAAAAGAGAA
ATACAAAGGACAATATGACAATCTTCTATTTTTCTATTCTTTTATGTACCAGTTGATAAAAAATGCCAAGTACTCTGGCA
CCAAGCAAACAACCAAACTTACCCATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 9 .58 RPM |
| SRP017611_kidney | 10 .57 RPM |
| SRP017611_brain | 6 .10 RPM |
| SRP040447_lung | 7 .62 RPM |
| SRP040447_skeletal_muscle | 9 .89 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000014926 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000104047 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000027921 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000006167 | ortholog_one2one | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000013291 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000002951 | ortholog_one2one | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000006464 | ortholog_one2one | 2 retrogenes | |
| Pan troglodytes | ENSPTRG00000007058 | ortholog_one2one | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000008358 | ortholog_one2one | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_250 | 77.90 | 59.60 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1476 | 70.59 | 89.07 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000003461 retrocopies