Parental gene: | UAP1, ENSCPOG00000004568 |
| Aliases: | None |
| Description: | UDP-N-acteylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:12457] |
| Organism: | Guinea Pig (Cavia porcellus) |
| Coordinates: | scaffold_39:142986..171200(+) |
>ENSCPOG00000004568
ATGAATGTTAATGACCTCAGACACAGATTGTCCAAAGCTGGGCAAGAACACCTGCTGCAGTTCTGGAATGAACTGGAAGA
AACCCACCAAGTGGAACTTTATGCAGAGCTCCAGGCCATGAACTTTGAAGAGCTGAATTTCTTTTTCCAAAAGGCTATTG
AAGGATTTAACCAGTCTTCTCACCAAGAGAAAATAGATGCACGGATGAAACCTATCCCTCGAGAGGTGTTGGGCAGTGCT
ACTAGGGACCAAGATCAGCTCCAGGCCTGGGAAAGTGAAGGACTTTTCCAGATTTCTCAGAACAAAGTAGCAGTTCTCCT
TCTAGCTGGTGGGCAGGGGACAAGACTTGGAGTTGCATATCCCAAGGGGATGTATGATGTTGGTTTACCATCCCATAAGA
CACTTTTTCAGATTCAAGCAGAGCGTATCCTGAAGCTACAACTGTTAGCTGAAAAATACTATGGCAACAAATGCATCATT
CCATGGTATATAATGACCAGTGGCAGAACAATGGAAGCAACAAAGGAGTTCTTCACAAAGCACAAGTACTTTGGTTTAAA
AAAGGAGAATATAATCTTTTTTCAGCAGGGAATGCTGCCTGCTATGAGTTTTGATGGGAAAATTATTTTGGAAGAGAAGA
ACAAAGTGTCTATGGCCCCAGATGGAAATGGGGGTCTTTATCGGGCTCTTGCAGCCCAGAATATTGTGGAGGATATGGAA
CAAAGAGGCATTTGGTGTATTCATGTTTATTGTGTGGACAATATATTGGTAAAAGTGGCAGATCCACGGTTCATTGGATT
TTGCATTCAGAAAGGAGCAGACTGTGGAGCAAAGGTGGTAGAAAAGACGAACCCTACAGAACCAGTTGGAGTGGTTTGCC
GCGTGGATGGAGTATACCAGGTGGTAGAATATAGTGAAATTTCCCTGGCAACAGCTCAGAAACGAAGCTCAGATGGACGA
CTGCTGTTCAATGCTGGAAACATTGCCAATCACTTCTTCACTATACCGTTCCTGAGAGATGTTGTCAATGTTTATGAACC
TCAGCTGCAGCACCATGTGGCTCAAAAGAAGATTCCGTATGTGGATTCCCGGGGGGAATTAATTAAGCCAGACAAGCCAA
ATGGAATAAAGATGGAAAAATTTGTCTTTGACATCTTCCAGTTTGCAAAGAAGTTTGTGGTGTATGAAGTGTTAAGGGAG
GACGAGTTCTCCCCGCTGAAGAACGCTGACAGTCAGAATGGGAAGGACAACCCTACGACTGCAAGGCACGCTTTGATGTC
CCTGCACCATTGCTGGGTGCTCAATGCTGGGGGCCACTTCATAGATGAAAATGGTTCCCGCCTTCCAGCGATTCCCCGCA
GTGCTACAAATGGAAAGTCAGAGACCACCCCAGCTGATGTCAATCACAACTTAAAGGATGCCAATGATGTACCAATCCAG
TGTGAAATCTCTCCTCTTATTTCCTATGCTGGAGAAGGCCTAGAAAGTTTTGTGGCAGATAAAGAATTCCATGCACCTTT
AATCATTGATGAGAATGGAGTCCATGAGCTGGTGAAAAATGGAATATGA
ATGAATGTTAATGACCTCAGACACAGATTGTCCAAAGCTGGGCAAGAACACCTGCTGCAGTTCTGGAATGAACTGGAAGA
AACCCACCAAGTGGAACTTTATGCAGAGCTCCAGGCCATGAACTTTGAAGAGCTGAATTTCTTTTTCCAAAAGGCTATTG
AAGGATTTAACCAGTCTTCTCACCAAGAGAAAATAGATGCACGGATGAAACCTATCCCTCGAGAGGTGTTGGGCAGTGCT
ACTAGGGACCAAGATCAGCTCCAGGCCTGGGAAAGTGAAGGACTTTTCCAGATTTCTCAGAACAAAGTAGCAGTTCTCCT
TCTAGCTGGTGGGCAGGGGACAAGACTTGGAGTTGCATATCCCAAGGGGATGTATGATGTTGGTTTACCATCCCATAAGA
CACTTTTTCAGATTCAAGCAGAGCGTATCCTGAAGCTACAACTGTTAGCTGAAAAATACTATGGCAACAAATGCATCATT
CCATGGTATATAATGACCAGTGGCAGAACAATGGAAGCAACAAAGGAGTTCTTCACAAAGCACAAGTACTTTGGTTTAAA
AAAGGAGAATATAATCTTTTTTCAGCAGGGAATGCTGCCTGCTATGAGTTTTGATGGGAAAATTATTTTGGAAGAGAAGA
ACAAAGTGTCTATGGCCCCAGATGGAAATGGGGGTCTTTATCGGGCTCTTGCAGCCCAGAATATTGTGGAGGATATGGAA
CAAAGAGGCATTTGGTGTATTCATGTTTATTGTGTGGACAATATATTGGTAAAAGTGGCAGATCCACGGTTCATTGGATT
TTGCATTCAGAAAGGAGCAGACTGTGGAGCAAAGGTGGTAGAAAAGACGAACCCTACAGAACCAGTTGGAGTGGTTTGCC
GCGTGGATGGAGTATACCAGGTGGTAGAATATAGTGAAATTTCCCTGGCAACAGCTCAGAAACGAAGCTCAGATGGACGA
CTGCTGTTCAATGCTGGAAACATTGCCAATCACTTCTTCACTATACCGTTCCTGAGAGATGTTGTCAATGTTTATGAACC
TCAGCTGCAGCACCATGTGGCTCAAAAGAAGATTCCGTATGTGGATTCCCGGGGGGAATTAATTAAGCCAGACAAGCCAA
ATGGAATAAAGATGGAAAAATTTGTCTTTGACATCTTCCAGTTTGCAAAGAAGTTTGTGGTGTATGAAGTGTTAAGGGAG
GACGAGTTCTCCCCGCTGAAGAACGCTGACAGTCAGAATGGGAAGGACAACCCTACGACTGCAAGGCACGCTTTGATGTC
CCTGCACCATTGCTGGGTGCTCAATGCTGGGGGCCACTTCATAGATGAAAATGGTTCCCGCCTTCCAGCGATTCCCCGCA
GTGCTACAAATGGAAAGTCAGAGACCACCCCAGCTGATGTCAATCACAACTTAAAGGATGCCAATGATGTACCAATCCAG
TGTGAAATCTCTCCTCTTATTTCCTATGCTGGAGAAGGCCTAGAAAGTTTTGTGGCAGATAAAGAATTCCATGCACCTTT
AATCATTGATGAGAATGGAGTCCATGAGCTGGTGAAAAATGGAATATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 29 .25 RPM |
| SRP017611_kidney | 59 .25 RPM |
| SRP017611_brain | 27 .38 RPM |
| SRP040447_lung | 36 .92 RPM |
| SRP040447_skeletal_muscle | 25 .11 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000004264 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000024661 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000019514 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000002926 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000002725 | ortholog_one2many | 3 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cpor_511 | 59.34 | 62.26 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cpor_1186 | 60.06 | 62.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cpor_1187 | 61.75 | 62.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cpor_1188 | 58.08 | 62.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_cpor_1189 | 59.82 | 62.26 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCPOG00000004568 retrocopies