Parental gene:

UAP1, ENSDNOG00000024661

Aliases:None
Description:UDP-N-acteylglucosamine pyrophosphorylase 1 [Source:HGNC Symbol;Acc:12457]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2188:29011..79005(+)


>ENSDNOG00000024661
ATGAACGTTAATGACCTCAAACGCAGGTTGTCCAAGGCTGGGCAAGAACACCTGCTACAGTTCTGGAATGAGTTGGAAGA
AGCCCAACAGGTAGAACTTTATGAAGAGCTCCAGGCCATGAACTTTGAGGAACTGAACTTATTTTTCCAAAAGGCCATTG
AAGGATTTAACCAATCCTCTTATCAAGAGAAAGTGGACGCACGAATGGAACCTGTACCTCGAGAGGTATTGGGCAGTGCT
ACTAGGGATCAGGATCAGCTCCAGGCCTGGGAAAGTGAAGGACTTTTCCAGATTTCTCAGAACAAAGTAGCAGTTCTTCT
TCTAGCTGGTGGTCAGGGGACAAGACTCGGCGTTGCATATCCTAAAGGGATGTATGATGTTGGTTTGCCATCACACAAAA
CACTTTTTCAGATTCAAGCAGAGCGTATCCTGAAGCTACAGCAGTTAGCTGAAAAATATCATGGCAAAAAGTGTACCATC
CCATGGTATATAATGACCAGTGGCAGAACAATGGAATCTACAAAGGAATTCTTCATAAAGCACAAGTACTTTGGTTTAAA
AAAAGAGAATGTAATCTTTTTTCAGCAAGGAATGCTGCCTGCTATGAAGTTTGATGGGAAAATTATTTTAGAAGAGAAGA
GCAAAGTTTCTATGGCTCCAGATGGGAATGGTGGTCTTTATCGGGCTCTTGCAGCCCAGAATATTGTGGAAGATATGGAG
CAAAGAGGCATTTGGAGTATTCATGTCTATTGTGTTGATAACATATTAGTAAAAGTGGCAGATCCACGATTCATTGGATT
TTGCATTCAGAAAGGAGCAGACTGTGGAGCAAAGGTGGTAGAGAAGACAAACCCTACAGAACCAGTTGGAGTGGTTTGCC
GAGTGGATGGAGTGTACCAGGTGGTAGAATATAGCGAGATTTCCCTGGCAACAGCACAAAAAAGAAGCTTAGATGGACGG
CTGCTGTTCAATGCCGGGAACATCGCCAACCATTTCTTCACTATACCGTTTCTGAGAGATGTAGTCAANNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCA
GTGCTACAAATGGAAAGTCAGAGACCATCACAGCTGATGTCAATGACAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGAATAGAAAGTTATGTGGCAGATAAAGAATTCCATGCACCTTT
AATCATTGATGAGAATGGAGTCCATGAGCTGGTGAAGAATGGTATATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 183 .58 RPM
SRP012922_cerebellum 31 .07 RPM
SRP012922_heart 18 .10 RPM
SRP012922_kidney 20 .26 RPM
SRP012922_liver 29 .41 RPM
SRP012922_lung 60 .33 RPM
SRP012922_quadricep_muscle 27 .87 RPM
SRP012922_spleen 29 .19 RPM



Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000004264 ortholog_one2one 1 retrogene
retro_cjac_2537,
Cavia porcellus ENSCPOG00000004568 ortholog_one2many 5 retrogenes
retro_cpor_1186, retro_cpor_1187, retro_cpor_1188, retro_cpor_1189, retro_cpor_511,
Macaca mulatta ENSMMUG00000019514 ortholog_one2one 1 retrogene
retro_mmul_1238,
Rattus norvegicus ENSRNOG00000002926 ortholog_one2one 1 retrogene
retro_rnor_2277,
Tarsius syrichta ENSTSYG00000002725 ortholog_one2one 3 retrogenes
retro_tsyr_121, retro_tsyr_390, retro_tsyr_582,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1035 91.35 50.77
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Download FASTA sequences of all ENSDNOG00000024661 retrocopies