Parental gene:

ABCE1, ENSCPOG00000007367

Aliases:None
Description:None
Organism:Guinea Pig (Cavia porcellus)
Coordinates:scaffold_7:21817885..21840512(-)


>ENSCPOG00000007367
ATGGCAGACAAACTGACCAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGGCAGGAGTGCAAAAA
AAGTTGTCCTGTGGTTCGAATGGGAAAATTATGCATAGAAGTTACACCACAGAGCAAAATAGCATGGATTTCTGAAACTC
TTTGTATTGGTTGTGGTATTTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATTTACCAAGTAACTTGGAA
AAAGAAACAACACATCGATATTGTGCCAATGCCTTCAAACTTCACAGGTTGCCTATCCCTCGTCCAGGTGAAGTCTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAATCAACAGCTTTAAAAATTTTAGCAGGAAAGCAGAAGCCAAACCTTGGAAAGT
ACGATGATCCTCCTGACTGGCAGGAGATTCTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACTAAGATTCTG
GAAGATGATCTAAAAGCCATTATCAAACCTCAGTATGTGGACCAGATTCCCAAGGCAGCAAAGGGGACGGTGGGGTCTAT
TTTGGATCGAAAGGATGAAACAAAGACACAGGCAATTGTATGTCAACAACTTGATTTAACCCACCTAAAAGAACGAAATG
TTGAAGATCTTTCAGGAGGAGAATTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAAAGCTGATATCTTCATGTTT
GATGAGCCCTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATTCGATCTCTGATAAATCCAGATAG
ATATATCATTGTGGTGGAGCATGATCTAAGTGTATTAGACTACCTCTCTGACTTCATCTGCTGTTTATATGGTGTACCAA
GTGCTTATGGGGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGCATAAACATTTTTTTGGATGGCTATGTTCCAACAGAA
AATTTGAGATTCCGAGATGCATCTCTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAAATGTGTAT
GTATAAATATCCAGGAATGAAGAAAAAAATGGGAGAATTTGAGCTAGCAATTGTAGCTGGAGAGTTTACTGATTCTGAAA
TCATGGTGATGCTAGGGGAAAATGGTACAGGTAAAACGACATTTATCAGAATGCTTGCTGGGCGACTGAAACCTGATGAA
GGAGGAGAAGTGCCTGTTCTAAATGTCAGTTATAAGCCACAGAAAATCAGTCCCAAATCAACTGGAAGTGTTCGCCAGTT
ACTACATGAAAAGATACGAGATGCTTATACTCATCCACAGTTTGTGACTGACGTAATGAAGCCTTTGCAGATTGAAAATA
TCATTGATCAAGAGGTTCAGACATTATCTGGTGGTGAACTGCAGCGAGTAGCTTTAGCTCTTTGTTTGGGCAAACCTGCT
GATGTCTATTTAATTGATGAGCCATCTGCATATTTGGACTCTGAGCAAAGATTGATGGCAGCTCGGGTTGTGAAACGTTT
TATACTCCACGCAAAGAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATTTAGCTGATCGGGTCATCG
TTTTTGATGGTGTTCCATCTAAAAACACAGTTGCAAACAGTCCTCAAACCCTTTTGGCTGGCATGAACAAATTTTTGTCT
CAGCTGGAAATTACATTCAGAAGAGATCCAAACAACTATAGACCACGAATAAATAAACTCAACTCAATTAAGGATGTAGA
ACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG

Library Parental gene expression (RPM)
SRP017611_liver 37 .39 RPM
SRP017611_kidney 50 .35 RPM
SRP017611_brain 41 .53 RPM
SRP040447_lung 31 .32 RPM
SRP040447_skeletal_muscle 25 .80 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004534 ortholog_one2one 1 retrogene
retro_chof_1280,
Homo sapiens ENSG00000164163 ortholog_one2one 1 retrogene
retro_hsap_3826,
Macaca mulatta ENSMMUG00000004433 ortholog_one2one 1 retrogene
retro_mmul_1628,
Mus musculus ENSMUSG00000058355 ortholog_one2one 1 retrogene
retro_mmus_1503,
Nomascus leucogenys ENSNLEG00000005460 ortholog_one2one 1 retrogene
retro_nleu_2125,
Oryctolagus cuniculus ENSOCUG00000001821 ortholog_one2one 2 retrogenes
retro_ocun_1925, retro_ocun_668,
Procavia capensis ENSPCAG00000006183 ortholog_one2one 1 retrogene
retro_pcap_90,
Pongo abelii ENSPPYG00000015097 ortholog_one2one 1 retrogene
retro_pabe_3067,
Pan troglodytes ENSPTRG00000016481 ortholog_one2one 1 retrogene
retro_ptro_2603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_cpor_289 67.68 58.93
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Download FASTA sequences of all ENSCPOG00000007367 retrocopies