Parental gene: | ABCE1, ENSOCUG00000001821 |
| Aliases: | None |
| Description: | ATP-binding cassette, sub-family E (OABP), member 1 [Source:HGNC Symbol;Acc:69] |
| Organism: | Rabbit (Oryctolagus cuniculus) |
| Coordinates: | 15:19534138..19556743(-) |
>ENSOCUG00000001821
ATGGCGGACAAATTAACGAGAATTGCTATTGTCAACCATGACAAGTGTAAACCTAAGAAATGTCGACAGGAGTGCAAAAA
GAGTTGCCCTGTGGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCTGAAACTC
TTTGTATTGGTTGTGGTATTTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATTTACCAAGCAACTTGGAA
AAAGAAACAACACATCGGTATTGTGCCAATGCCTTCAAACTTCACAGGTTACCTATCCCTCGTCCAGGTGAAGTTTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGGAAGCAGAAGCCAAACCTTGGAAAGT
ATGATGATCCTCCTGACTGGCAAGAAATTTTGACTTATTTCCGCGGCTCTGAGTTACAGAATTACTTTACCAAGATTCTG
GAAGATGACCTGAAAGCCATTATCAAACCTCAGTATGTAGACCAGATTCCCAAGGCTGCAAAGGGAACAGTTGGGTCTAT
TTTGGACAGAAAGGATGAAACAAAGACACAGGCAATTGTATGTCAACAGCTTGATTTAACCCACCTAAAAGAACGAAATG
TTGAAGATCTTTCAGGAGGAGAATTGCAAAGATTTGCTTGTGCGGTTGTTTGCATACAGAAAGCTGATATTTTCATGTTT
GATGAACCTTCTAGTTACTTAGATGTCAAGCAGCGATTAAAGGCTGCTATTACTATACGATCTTTAATAAACCCAGATAG
GTACATCATTGTGGTGGAGCATGATCTAAGTGTATTAGACTATCTCTCTGACTTCATCTGCTGTTTGTATGGTGTGCCAA
GCGCTTATGGTGTTGTAACTATGCCTTTTAGTGTTAGAGAAGGCATAAACATTTTCTTGGATGGCTATGTTCCAACAGAA
AACTTGAGATTCAGAGATGCATCGCTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTAT
GTATAAATACCCAGGGATGAAGAAAAAGATGGGAGAGTTTGAGCTAGCAATTGTAGCTGGAGAGTTTACGGATTCTGAAA
TTATGGTGATGCTTGGGGAAAATGGTACAGGCAAAACGACATTCATCAGAATGCTTGCTGGAAGGCTTAAACCTGATGAA
GGAGGAGAAGTGCCAGTTCTAAATGTCAGTTATAAGCCACAAAAGATCAGTCCCAAATCAACTGGAAGTGTTCGCCAGTT
ATTACATGAAAAGATAAGAGATGCTTACACTCATCCGCAGTTTGTGACTGATGTAATGAAGCCTCTGCAGATTGAAAACA
TCATTGATCAAGAGGTGCAGACATTATCTGGAGGAGAACTACAGCGAGTAGCTTTAGCTCTTTGCTTGGGCAAACCTGCT
GATGTCTATTTAATTGATGAGCCATCTGCATATTTGGATTCTGAGCAAAGATTGATGGCAGCTCGAGTTGTCAAACGTTT
CATACTCCATGCGAAGAAGACGGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCAGATCGAGTCATCG
TTTTTGATGGTGTCCCATCTAAGAACACTGTTGCAAATAGTCCTCAAACCCTTTTGGCCGGCATGAATAAATTTTTGTCT
CAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGACCACGAATAAACAAACTCAACTCAATTAAGGATGTAGA
ACAGAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG
ATGGCGGACAAATTAACGAGAATTGCTATTGTCAACCATGACAAGTGTAAACCTAAGAAATGTCGACAGGAGTGCAAAAA
GAGTTGCCCTGTGGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCTGAAACTC
TTTGTATTGGTTGTGGTATTTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATTTACCAAGCAACTTGGAA
AAAGAAACAACACATCGGTATTGTGCCAATGCCTTCAAACTTCACAGGTTACCTATCCCTCGTCCAGGTGAAGTTTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGGAAGCAGAAGCCAAACCTTGGAAAGT
ATGATGATCCTCCTGACTGGCAAGAAATTTTGACTTATTTCCGCGGCTCTGAGTTACAGAATTACTTTACCAAGATTCTG
GAAGATGACCTGAAAGCCATTATCAAACCTCAGTATGTAGACCAGATTCCCAAGGCTGCAAAGGGAACAGTTGGGTCTAT
TTTGGACAGAAAGGATGAAACAAAGACACAGGCAATTGTATGTCAACAGCTTGATTTAACCCACCTAAAAGAACGAAATG
TTGAAGATCTTTCAGGAGGAGAATTGCAAAGATTTGCTTGTGCGGTTGTTTGCATACAGAAAGCTGATATTTTCATGTTT
GATGAACCTTCTAGTTACTTAGATGTCAAGCAGCGATTAAAGGCTGCTATTACTATACGATCTTTAATAAACCCAGATAG
GTACATCATTGTGGTGGAGCATGATCTAAGTGTATTAGACTATCTCTCTGACTTCATCTGCTGTTTGTATGGTGTGCCAA
GCGCTTATGGTGTTGTAACTATGCCTTTTAGTGTTAGAGAAGGCATAAACATTTTCTTGGATGGCTATGTTCCAACAGAA
AACTTGAGATTCAGAGATGCATCGCTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTAT
GTATAAATACCCAGGGATGAAGAAAAAGATGGGAGAGTTTGAGCTAGCAATTGTAGCTGGAGAGTTTACGGATTCTGAAA
TTATGGTGATGCTTGGGGAAAATGGTACAGGCAAAACGACATTCATCAGAATGCTTGCTGGAAGGCTTAAACCTGATGAA
GGAGGAGAAGTGCCAGTTCTAAATGTCAGTTATAAGCCACAAAAGATCAGTCCCAAATCAACTGGAAGTGTTCGCCAGTT
ATTACATGAAAAGATAAGAGATGCTTACACTCATCCGCAGTTTGTGACTGATGTAATGAAGCCTCTGCAGATTGAAAACA
TCATTGATCAAGAGGTGCAGACATTATCTGGAGGAGAACTACAGCGAGTAGCTTTAGCTCTTTGCTTGGGCAAACCTGCT
GATGTCTATTTAATTGATGAGCCATCTGCATATTTGGATTCTGAGCAAAGATTGATGGCAGCTCGAGTTGTCAAACGTTT
CATACTCCATGCGAAGAAGACGGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCAGATCGAGTCATCG
TTTTTGATGGTGTCCCATCTAAGAACACTGTTGCAAATAGTCCTCAAACCCTTTTGGCCGGCATGAATAAATTTTTGTCT
CAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGACCACGAATAAACAAACTCAACTCAATTAAGGATGTAGA
ACAGAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 24 .74 RPM |
| SRP017611_kidney | 71 .76 RPM |
| SRP017611_brain | 61 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000004534 | ortholog_one2one | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000007367 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000164163 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000004433 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000058355 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005460 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006183 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015097 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000016481 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ocun_668 | 95.38 | 57.76 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ocun_1925 | 72.12 | 51.25 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOCUG00000001821 retrocopies