Parental gene:

Abce1, ENSMUSG00000058355

Aliases:Abce1, C79080, Oabp, RLI, RNS41, Rnaseli
Description:ATP-binding cassette, sub-family E (OABP), member 1 [Source:MGI Symbol;Acc:MGI:1195458]
Organism:Mouse (Mus musculus)
Coordinates:8:79683441..79711740(-)


>ENSMUSG00000058355
ATGGCAGACAAATTAACAAGAATTGCTATTGTCAACCACGACAAATGCAAACCTAAGAAATGTCGACAGGAGTGCAAAAA
GAGTTGCCCTGTGGTTCGGATGGGAAAATTGTGCATAGAAGTTACACCCCAGAGCAAAATAGCATGGATTTCTGAAACTC
TCTGTATTGGTTGTGGTATTTGTATTAAGAAATGTCCCTTTGGCGCCTTATCAATTGTCAATTTGCCAAGCAACTTGGAA
AAAGAAACAACACATCGCTACTGTGCCAATGCCTTCAAGCTTCACAGGTTGCCTATCCCTCGTCCAGGTGAAGTTTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCACTAAAAATTTTAGCAGGAAAACAAAAGCCAAACCTTGGAAAGT
ATGATGATCCACCTGATTGGCAAGAGATTTTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACCAAGATTCTC
GAAGATGACCTAAAAGCCATTATCAAACCTCAATATGTAGACCAAATTCCCAAGGCTGCAAAGGGGACAGTGGGCTCTAT
TCTGGACCGAAAAGATGAAACAAAGACACAGGCAATTGTATGTCAGCAGCTTGATTTAACTCACCTTAAAGAACGAAATG
TCGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAAAAGGCTGATATTTTTATGTTT
GATGAACCTTCTAGTTACCTCGATGTCAAGCAACGTTTAAAGGCTGCCATTACGATTCGATCTCTAATAAATCCAGATAG
ATATATCATTGTGGTGGAGCATGATCTAAGTGTATTAGACTATCTCTCTGACTTCATCTGCTGTCTATATGGGGTACCGA
GTGCTTATGGTGTTGTCACGATGCCTTTTAGTGTAAGAGAAGGCATAAATATATTTTTGGATGGCTATGTTCCAACAGAG
AACCTGAGGTTCAGGGATGCGTCGCTTGTTTTTAAGGTAGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGCAT
GTATAAATATCCCGGGATGAAGAAAAAGATGGGAGAGTTCGAGCTAGCAATTGTAGCTGGAGAGTTCACGGACTCTGAGA
TCATGGTGATGCTGGGGGAGAATGGTACAGGTAAAACTACATTTATCAGAATGCTTGCTGGAAGGCTTAAACCAGATGAA
GGAGGAGAAGTGCCAGTTCTAAATGTCAGTTATAAGCCACAGAAAATCAGTCCCAAATCAACAGGAAGTGTTCGCCAGTT
ACTGCATGAAAAGATCAGAGATGCTTACACGCATCCGCAGTTTGTGACTGATGTAATGAAGCCCCTACAGATTGAAAACA
TCATTGACCAAGAGGTACAGACATTGTCTGGTGGTGAACTTCAGCGAGTAGCTTTAGCTCTTTGTTTGGGCAAACCTGCT
GACGTCTATTTGATTGATGAACCTTCTGCATATTTGGATTCTGAGCAAAGATTAATGGCAGCTCGGGTCGTCAAACGTTT
CATTCTCCATGCAAAGAAGACAGCTTTTGTTGTAGAACATGACTTCATCATGGCCACCTATCTAGCAGATCGCGTCATCG
TTTTTGATGGTGTTCCATCAAAGAACACAGTTGCAAACAGTCCTCAGACTCTTTTGGCTGGCATGAACAAATTTTTGTCT
CAGCTCGAAATTACATTCAGAAGAGACCCCAACAACTACAGGCCACGAATAAATAAGCTCAATTCAATCAAGGATGTAGA
ACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG

Library Parental gene expression (RPM)
SRP007412_brain 83 .29 RPM
SRP007412_cerebellum 70 .86 RPM
SRP007412_heart 56 .84 RPM
SRP007412_kidney 78 .04 RPM
SRP007412_liver 74 .06 RPM
SRP007412_testis 95 .32 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004534 ortholog_one2one 1 retrogene
retro_chof_1280,
Cavia porcellus ENSCPOG00000007367 ortholog_one2one 1 retrogene
retro_cpor_289,
Homo sapiens ENSG00000164163 ortholog_one2one 1 retrogene
retro_hsap_3826,
Macaca mulatta ENSMMUG00000004433 ortholog_one2one 1 retrogene
retro_mmul_1628,
Nomascus leucogenys ENSNLEG00000005460 ortholog_one2one 1 retrogene
retro_nleu_2125,
Oryctolagus cuniculus ENSOCUG00000001821 ortholog_one2one 2 retrogenes
retro_ocun_1925, retro_ocun_668,
Procavia capensis ENSPCAG00000006183 ortholog_one2one 1 retrogene
retro_pcap_90,
Pongo abelii ENSPPYG00000015097 ortholog_one2one 1 retrogene
retro_pabe_3067,
Pan troglodytes ENSPTRG00000016481 ortholog_one2one 1 retrogene
retro_ptro_2603,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_1503 86.60 88.31
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Download FASTA sequences of all ENSMUSG00000058355 retrocopies