Parental gene:

ABCE1, ENSPTRG00000016481

Aliases:None
Description:Pan troglodytes ATP-binding cassette, sub-family E (OABP), member 1 (ABCE1), mRNA. [Source:RefSeq mRNA;Acc:NM_001246609]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:4:148087426..148119497(+)


>ENSPTRG00000016481
ATGGCAGACAAGTTAACGAGAATTGCTATTGTCAACCATGACAAATGTAAACCTAAGAAATGTCGACAGGAATGCAAAAA
GAGTTGTCCTGTAGTTCGAATGGGAAAATTATGCATAGAGGTTACACCCCAGAGCAAAATAGCATGGATTTCCGAAACTC
TTTGTATTGGTTGTGGTATCTGTATTAAGAAATGCCCCTTTGGCGCCTTATCAATTGTCAATCTACCAAGCAACTTGGAA
AAAGAAACCACACATCGATATTGTGCCAATGCCTTCAAACTTCACAGGTTGCCTATCCCTCGTCCAGGTGAAGTTTTGGG
ATTAGTTGGAACTAATGGTATTGGAAAGTCAACTGCTTTAAAAATTTTAGCAGGAAAACAAAAGCCAAACCTTGGAAAGT
ACGATGATCCTCCTGACTGGCAGGAGATTTTGACTTATTTCCGTGGATCTGAATTACAAAATTACTTTACAAAGATTCTA
GAAGATGACCTAAAAGCCATCATCAAACCTCAATATGTAGACCAGATTCCTAAGGCTGCAAAGGGGACAGTGGGATCTAT
TTTGGACCGAAAAGATGAAACAAAGACACAGGCAATTGTATGTCAGCAGCTTGATTTAACCCACCTAAAAGAACGAAATG
TTGAAGATCTTTCAGGAGGAGAGTTGCAGAGATTTGCTTGTGCTGTCGTTTGCATACAGAAAGCTGATATTTTCATGTTT
GATGAGCCTTCTAGTTACCTAGATGTCAAGCAGCGTTTAAAGGCTGCTATTACTATACGATCTCTAATAAATCCAGATAG
ATATATCATTGTGGTGGAACATGATCTAAGTGTATTAGACTATCTCTCCGACTTCATCTGCTGTTTATATGGTGTACCAA
GCGCCTATGGAGTTGTCACTATGCCTTTTAGTGTAAGAGAAGGCATAAACATTTTTTTGGATGGCTATGTTCCAACAGAA
AACTTGAGATTCAGAGATGCATCACTTGTTTTTAAAGTGGCTGAGACAGCAAATGAAGAAGAAGTTAAAAAGATGTGTAT
GTATAAATATCCAGGAATGAAGAAAAAAATGGGAGAGTTTGAGCTAGCAATTGTAGCTGGAGAGTTTACAGATTCTGAAA
TTATGGTGATGCTGGGGGAAAATGGAACGGGTAAAACGACATTTATCAGAATGCTTGCTGGAAGACTTAAACCTGATGAA
GGAGGAGAAGTACCAGTTCTAAATGTCAGTTATAAGCCACAGAAAATTAGTCCCAAATCAACTGGAAGTGTTCGCCAGTT
ACTACATGAAAAGATAAGAGATGCTTATACTCACCCACAATTTGTGACCGATGTAATGAAGCCTCTGCAAATTGAAAACA
TCATTGATCAAGAGGTGCAGACATTATCTGGTGGTGAACTACAGCGAGTAGCTTTAGCCCTTTGTTTGGGCAAACCTGCT
GATGTCTATTTAATTGATGAACCATCTGCATATTTGGATTCTGAGCAAAGACTGATGGCAGCTCGAGTTGTCAAACGTTT
CATACTCCATGCAAAAAAGACAGCCTTTGTTGTGGAACATGACTTCATCATGGCCACCTATCTAGCGGATCGCGTCATCG
TTTTTGATGGTGTTCCATCTAAGAACACAGTTGCAAACAGTCCTCAAACCCTTTTGGCTGGCATGAATAAATTTTTGTCT
CAGCTTGAAATTACATTCAGAAGAGATCCAAACAACTATAGGCCACGAATAAACAAACTTAATTCAATTAAGGATGTAGA
ACAAAAGAAGAGTGGAAACTACTTTTTCTTGGATGATTAG

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 21 .31 RPM
SRP007412_cerebellum 27 .82 RPM
SRP007412_heart 24 .57 RPM
SRP007412_kidney 22 .46 RPM
SRP007412_liver 19 .12 RPM
SRP007412_testis 39 .10 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004534 ortholog_one2one 1 retrogene
retro_chof_1280,
Cavia porcellus ENSCPOG00000007367 ortholog_one2one 1 retrogene
retro_cpor_289,
Homo sapiens ENSG00000164163 ortholog_one2one 1 retrogene
retro_hsap_3826,
Macaca mulatta ENSMMUG00000004433 ortholog_one2one 1 retrogene
retro_mmul_1628,
Mus musculus ENSMUSG00000058355 ortholog_one2one 1 retrogene
retro_mmus_1503,
Nomascus leucogenys ENSNLEG00000005460 ortholog_one2one 1 retrogene
retro_nleu_2125,
Oryctolagus cuniculus ENSOCUG00000001821 ortholog_one2one 2 retrogenes
retro_ocun_1925, retro_ocun_668,
Procavia capensis ENSPCAG00000006183 ortholog_one2one 1 retrogene
retro_pcap_90,
Pongo abelii ENSPPYG00000015097 ortholog_one2one 1 retrogene
retro_pabe_3067,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2603 89.53 99.67
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Download FASTA sequences of all ENSPTRG00000016481 retrocopies